RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 PSME2Q9UL46 239 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 HS3ST4Q9Y661 456 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 DGKBQ9Y6T7 804 aa12.39□□□□□ -0.43
CAPN1-208ENST00000527323 DNAH14Q0VDD8 3507 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 DEAF1O75398 565 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 C1RP00736 705 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 INHBBP09529 407 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 FDXRP22570 491 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 SHMT2P34897 504 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 LEMD2Q8NC56 503 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 STAG3L4Q8TBR4 150 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 SDCCAG3Q96C92 435 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PPM1MQ96MI6 270 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 LHPPQ9H008 270 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 RAD21L1Q9H4I0 556 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 CCDC162PA2VCL2 907 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 H0YAE9 185 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 HAPLN1P10915 354 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 EN2P19622 333 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 FUT4P22083 530 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PRDX3P30048 256 aaKnown RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 FMO4P31512 558 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 GRIK1P39086 918 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PGFP49763 221 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 ARSFP54793 590 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 COQ5Q5HYK3 327 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 LRRC49Q8IUZ0 686 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 FNDC5Q8NAU1 212 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 TRUB1Q8WWH5 349 aaKnown RBP12.38□□□□□ -0.43
CAPN1-208ENST00000527323 TMBIM1Q969X1 311 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
CAPN1-208ENST00000527323 C16orf96A6NNT2 1141 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 GNGT2O14610 69 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 ENPP3O14638 875 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SERPINB7O75635 380 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CLPXO76031 633 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 THRBP10828 461 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CSF2RAP15509 400 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 IL7RP16871 459 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 OCA2Q04671 838 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CHRNB3Q05901 458 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 TSNQ15631 228 aaKnown RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PAQR3Q6TCH7 311 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 USP51Q70EK9 711 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 R3HCC1LQ7Z5L2 792 aaKnown RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PTRH1Q86Y79 214 aaKnown RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SCN4BQ8IWT1 228 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 TMEM199Q8N511 208 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 ITFG1Q8TB96 612 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 RAB2BQ8WUD1 216 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SGCDQ92629 289 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 ATOH8Q96SQ7 321 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 HGH1Q9BTY7 390 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CCDC90BQ9GZT6 254 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CSNK1G1Q9HCP0 422 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PCDHGA11Q9Y5H2 935 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SLC30A1Q9Y6M5 507 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 ASPDHA6ND91 283 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 MOXD2PA6NHM9 499 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 COQ9O75208 318 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PRSS56P0CW18 603 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PIGFQ07326 219 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 DAG1Q14118 895 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 RCAN2Q14206 197 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CYP2A13Q16696 494 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SPATS1Q496A3 300 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 NCCRP1Q6ZVX7 275 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 ERLEC1Q96DZ1 483 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 TFB2MQ9H5Q4 396 aaKnown RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 SLC52A3Q9NQ40 469 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 PAK6Q9NQU5 681 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-208ENST00000527323 AIG1Q9NVV5 245 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 GMIPQ9P107 970 aa12.37□□□□□ -0.43
CAPN1-208ENST00000527323 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 PTGES3LE9PB15 166 aa12.36□□□□□ -0.43
CAPN1-208ENST00000527323 LDB2O43679 373 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms