RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PDP1Q9P0J1 537 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 MALT1Q9UDY8 824 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 C3orf18Q9UK00 162 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 IDH3BO43837 385 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 MITFO75030 526 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ULK1O75385 1050 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CCNKO75909 580 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 IDO1P14902 403 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PRDX6P30041 224 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ALDH9A1P49189 494 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 BLVRAP53004 296 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 RAB25P57735 213 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CYP4F8P98187 520 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CD300CQ08708 224 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 KRT33BQ14525 404 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 GTDC1Q4AE62 458 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 EFL1Q7Z2Z2 1120 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC22A16Q86VW1 577 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TBC1D21Q8IYX1 336 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 MAF1Q9H063 256 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ASB8Q9H765 288 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 IPPKQ9H8X2 491 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PLAC1Q9HBJ0 212 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF232Q9UNY5 417 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 DNAJC15Q9Y5T4 150 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PIPSLA2A3N6 862 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 EFCAB10A6NFE3 127 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 MGAT4DA6NG13 374 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CLDN25C9JDP6 229 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 BCKDKO14874 412 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TRIM24O15164 1050 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 DENRO43583 198 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 DFNA5O60443 496 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 GABBR2O75899 941 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CDK14O94921 469 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 INMTO95050 263 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 SERPINA1P01009 418 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 IL12AP29459 219 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CRATP43155 626 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 KCNC1P48547 511 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 RPS24P62847 133 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CDH18Q13634 790 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 AAK1Q2M2I8 961 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ALFQ53S48 1182 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 PAGE3Q5JUK9 113 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CCNYL2Q5T2Q4 361 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 RNF219Q5W0B1 726 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 ANKRD26P1Q6NSI1 321 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM45BPQ6NSW5 357 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 SH2D5Q6ZV89 423 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM135Q86UB9 458 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 CAMKK1Q8N5S9 505 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TRPV3Q8NET8 790 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 OR52B6Q8NGF0 335 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 FAM45AQ8TCE6 357 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 NPY6RQ99463 290 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM245Q9H330 911 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 HIPK3Q9H422 1215 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 REEP1Q9H902 201 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 OPTCQ9UBM4 332 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TESMINQ9Y4I5 508 aa6.88□□□□□ -1.31
TGFBR3-207ENST00000525962 TPST2O60704 377 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 MTX2O75431 263 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 ECI2O75521 394 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 RPL17P18621 184 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 PTNP21246 168 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 SOX6P35712 828 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 PSEN2P49810 448 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 RNASE12Q5GAN4 147 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 ARMCX4Q5H9R4 360 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 NOL9Q5SY16 702 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 DUS1LQ6P1R4 473 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 NCCRP1Q6ZVX7 275 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 VPS37AQ8NEZ2 397 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 EEF1AKMT1Q8WVE0 214 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 PANX1Q96RD7 426 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 HNRNPABQ99729 332 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 HOPXQ9BPY8 73 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 ACAT2Q9BWD1 397 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 MRPS7Q9Y2R9 242 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 PRR23AA6NEV1 266 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 H3BMQ9 156 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 NDUFS2O75306 463 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 GLUD1P00367 558 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 C1RP00736 705 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 GBAP04062 536 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 EPB42P16452 691 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 MSH3P20585 1137 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 RPS12P25398 132 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 GKP32189 559 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 NCS1P62166 190 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 TAF10Q12962 218 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF846Q147U1 533 aa6.87□□□□□ -1.31
TGFBR3-207ENST00000525962 STARD3Q14849 445 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms