RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
CTTN-210ENST00000525852 PRAMEP78395 509 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 ILKQ13418 452 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 HLTFQ14527 1009 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTTN-210ENST00000525852 SEMA3AQ14563 771 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 INSCQ1MX18 579 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 C14orf28Q4W4Y0 310 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 FNBP1LQ5T0N5 605 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 CASC4Q6P4E1 433 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 AFTPHQ6ULP2 937 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 C17orf82Q86X59 251 aaPredicted RBP12.13□□□□□ -0.47
CTTN-210ENST00000525852 OR4L1Q8NH43 312 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 DCUN1D1Q96GG9 259 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 TIMM29Q9BSF4 260 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
CTTN-210ENST00000525852 MARCH4Q9P2E8 410 aaPredicted RBP12.13□□□□□ -0.47
CTTN-210ENST00000525852 TRBV23OR9-2A0A075B6M9 112 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 A6NCN8 305 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 KIF2AO00139 706 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 BANF1O75531 89 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 POP7O75817 140 aaKnown RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 SEC31AO94979 1220 aaKnown RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 TRIM16O95361 564 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 TUBB4AP04350 444 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 GP1BAP07359 652 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 ATP1B2P14415 290 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 PBLDP30039 288 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 CLCNKAP51800 687 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 ITGA8P53708 1063 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 INSM1Q01101 510 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 BCL7AQ4VC05 210 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 FAM83HQ6ZRV2 1179 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 ARL14Q8N4G2 192 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 SNF8Q96H20 258 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 SGSM3Q96HU1 749 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 PWWP2AQ96N64 755 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
CTTN-210ENST00000525852 OSGEPL1Q9H4B0 414 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 SNX24Q9Y343 169 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 RNF215Q9Y6U7 377 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 FREM2Q5SZK8 3169 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 KIF26BQ2KJY2 2108 aa12.12□□□□□ -0.47
CTTN-210ENST00000525852 FAM237BA0A1B0GVD1 139 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 EFCAB8A8MWE9 144 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 OPA1O60313 960 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 OR1I1O60431 355 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 VAPBO95292 243 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 RALBP11234 206 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 RPL10P27635 214 aaKnown RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 SHC2P98077 582 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 CKAP4Q07065 602 aaKnown RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 MORF4L2Q15014 288 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 HES3Q5TGS1 186 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 ARMC3Q5W041 872 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 IYDQ6PHW0 289 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 MAATS1Q7Z4T9 603 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 LDB1Q86U70 411 aaPredicted RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 AMZ2Q86W34 360 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 SFRP1Q8N474 314 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 SLC37A2Q8TED4 501 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 HEXDCQ8WVB3 486 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 NAT6Q93015 286 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 ZNF514Q96K75 400 aaPredicted RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 CCDC3Q9BQI4 270 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 ERP44Q9BS26 406 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 CATSPERZQ9NTU4 200 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 SCHIP1Q9P0W5 487 aaPredicted RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 SAMD15Q9P1V8 674 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 MAD1L1Q9Y6D9 718 aa12.11□□□□□ -0.47
CTTN-210ENST00000525852 DNMT3AQ9Y6K1 912 aaPredicted RBP12.11□□□□□ -0.47
CTTN-210ENST00000525852 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
CTTN-210ENST00000525852 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 GOLGA8TH3BQL2 631 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 CD3EAPO15446 510 aaKnown RBP12.1□□□□□ -0.47
CTTN-210ENST00000525852 CDK4P11802 303 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 F3P13726 295 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 GLB1P16278 677 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 PRLHRP49683 370 aa12.1□□□□□ -0.47
CTTN-210ENST00000525852 DRG2P55039 364 aaKnown RBP12.1□□□□□ -0.47
CTTN-210ENST00000525852 FOXK2Q01167 660 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms