RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SNX20Q7Z614 316 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 KCNMB4Q86W47 210 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 GATAD2AQ86YP4 633 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CILP2Q8IUL8 1156 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 RELL1Q8IUW5 271 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 VRK3Q8IV63 474 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CCDC116Q8IYX3 515 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 DDHD1Q8NEL9 900 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 OR56A4Q8NGH8 313 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 GPR150Q8NGU9 434 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 GIMAP7Q8NHV1 300 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 PYROXD1Q8WU10 500 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 PATE1Q8WXA2 126 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 UBXN4Q92575 508 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 LPGAT1Q92604 370 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 MRRFQ96E11 262 aaKnown RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 CERS2Q96G23 380 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SCARF2Q96GP6 870 aaPredicted RBP6.4□□□□□ -1.38
CD44-214ENST00000525211 BIRC8Q96P09 236 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 VPS35Q96QK1 796 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 NDNQ99608 321 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 TMEM168Q9H0V1 697 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 P2RY12Q9H244 342 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 WDR26Q9H7D7 661 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SMOXQ9NWM0 555 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 ZDHHC3Q9NYG2 299 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SAMD15Q9P1V8 674 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 MOSPD1Q9UJG1 213 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 FBXO5Q9UKT4 447 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SLC17A4Q9Y2C5 497 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 BTBD3Q9Y2F9 522 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 CRYL1Q9Y2S2 319 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 SLC30A1Q9Y6M5 507 aa6.4□□□□□ -1.38
CD44-214ENST00000525211 ZFHX2Q9C0A1 2572 aaPredicted RBP6.4□□□□□ -1.39
CD44-214ENST00000525211 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 TP53BP1Q12888 1972 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 PRSS38A1L453 326 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 MAGEB16A2A368 324 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 KRT87PA6NCN2 255 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 PROB1E7EW31 1015 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CHUKO15111 745 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 RIPK2O43353 540 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 NIPSNAP2O75323 286 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 RASGRP1O95267 797 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ASMTLO95671 621 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 TTC4O95801 387 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 LMNAP02545 664 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 POLBP06746 335 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 RETP07949 1114 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 HOXC4P09017 264 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 MYCLP1P12525 358 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 ITGALP20701 1170 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 FMO4P31512 558 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 HADHAP40939 763 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GNPDA1P46926 289 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 RABIFP47224 123 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 PMS2P54278 862 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CDKN2DP55273 166 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CAV1Q03135 178 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 FOXC1Q12948 553 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ZNF460Q14592 562 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 BRD3Q15059 726 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 DUOXA1Q1HG43 343 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ZNF423Q2M1K9 1284 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 HLA-BQ31612 363 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 KBTBD12Q3ZCT8 623 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SPDYCQ5MJ68 293 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ZNF470Q6ECI4 717 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 TMEM220Q6QAJ8 160 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 TMEM207Q6UWW9 146 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 MACC1Q6ZN28 852 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 PIM3Q86V86 326 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 HID1Q8IV36 788 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CNTN4Q8IWV2 1026 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 PHACTR4Q8IZ21 702 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SLC25A45Q8N413 288 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GPR161Q8N6U8 529 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 LMNTD1Q8N9Z9 388 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 C2CD4AQ8NCU7 369 aaPredicted RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 MYRIPQ8NFW9 859 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GSDMBQ8TAX9 411 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GDAP1Q8TB36 358 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 DTX3LQ8TDB6 740 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 LRRC39Q96DD0 335 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ATXN7L3BQ96GX2 97 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 LOXL4Q96JB6 756 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CAMK1GQ96NX5 476 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 SRPK1Q96SB4 655 aaKnown RBP6.39□□□□□ -1.39
CD44-214ENST00000525211 OLFM1Q99784 485 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 ZSCAN5AQ9BUG6 496 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 LRRC61Q9BV99 259 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 GAREM1Q9H706 876 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 VPS37BQ9H9H4 285 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 CAB39LQ9H9S4 337 aa6.39□□□□□ -1.39
CD44-214ENST00000525211 TRIM39Q9HCM9 518 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms