RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 EPB41L1Q9H4G0 881 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM96AQ9H5X1 160 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CHRAC1Q9NRG0 131 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPATS2LQ9NUQ6 558 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SYBUQ9NX95 663 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TOR4AQ9NXH8 423 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 AKAP7Q9P0M2 348 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 LRIT1Q9P2V4 623 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM8A1Q9UBU6 413 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 ACSL5Q9ULC5 683 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SOX13Q9UN79 622 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLCA2Q9UQC9 943 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 VPS9D1Q9Y2B5 631 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 UTP11Q9Y3A2 253 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NEUROG3Q9Y4Z2 214 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CACNA1EQ15878 2313 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 ADAMTS9Q9P2N4 1935 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TRBV5-4A0A0C4DH59 114 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 LY6G6EA0A0G2JKS1 128 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM237BA0A1B0GVD1 139 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 UBA6A0AVT1 1052 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MGAT4DA6NG13 374 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR51F1A6NGY5 319 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 AGAP14A8MT82 685 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 EFCAB8A8MWE9 144 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 IFRD1O00458 451 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CD3EAPO15446 510 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TTI1O43156 1089 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 DUX1O43812 170 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KDM1AO60341 852 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NOBOXO60393 691 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CSO75390 466 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM63AO94886 807 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 DKK1O94907 266 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 VAPBO95292 243 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TTC4O95801 387 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MT-CO3P00414 261 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 GOT2P00505 430 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 VIPP01282 170 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 FUCA1P04066 466 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPLP0P05388 317 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 POLBP06746 335 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MYF5P13349 255 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PGAM1P18669 254 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ALDH4A1P30038 563 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 FOXN2P32314 431 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAPK9P45984 424 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 FASLGP48023 281 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PRLHRP49683 370 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARSDP51689 593 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARL4CP56559 192 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 GPLD1P80108 840 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 INSM1Q01101 510 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PLOD1Q02809 727 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ACVR1Q04771 509 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 C2orf54Q08AI8 447 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 DMPKQ09013 629 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MSLNQ13421 630 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PLCL1Q15111 1095 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SMAD1Q15797 465 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 DBN1Q16643 649 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 HIF1AQ16665 826 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLPPQ16740 277 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 AMZ1Q400G9 498 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KHDC1Q4VXA5 237 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PERM1Q5SV97 790 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 RNASEH2BQ5TBB1 312 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 AGAP9Q5VTM2 703 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ANKRD22Q5VYY1 191 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PTRHD1Q6GMV3 140 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIAA0930Q6ICG6 404 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 C8orf74Q6P047 294 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KLHL35Q6PF15 583 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 WASH2PQ6VEQ5 465 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PACS1Q6VY07 963 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NYAP1Q6ZVC0 841 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMPRSS7Q7RTY8 843 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPRED1Q7Z699 444 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 LRRC6Q86X45 466 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NAGSQ8N159 534 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SFRP1Q8N474 314 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARL14Q8N4G2 192 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NAT8LQ8N9F0 302 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPATA4Q8NEY3 305 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR13J1Q8NGT2 312 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR2L2Q8NH16 312 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CALML6Q8TD86 181 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC37A2Q8TED4 501 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF669Q96BR6 464 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NXPE2Q96DL1 559 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SGF29Q96ES7 293 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SERPINB12Q96P63 405 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PANX3Q96QZ0 392 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 DPYSL5Q9BPU6 564 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TRIM51Q9BSJ1 452 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCM2Q9BSQ5 444 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM167BQ9BTA0 163 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIFC1Q9BW19 673 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms