RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TBC1D3EA0A087X179 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3KA0A087X1G2 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3FA6NER0 549 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 GOLGA6L6A8MZA4 724 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TMEM233B4DJY2 109 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3LB9A6J9 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 AQP9O43315 295 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 DPM1O60762 260 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 RASSF9O75901 435 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CSF2P04141 144 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CYP21A2P08686 494 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3HP0C7X1 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CXCL8P10145 99 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 PIM1P11309 404 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 HARSP12081 509 aaKnown RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 GOT1P17174 413 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 COMTP21964 271 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 ANXA13P27216 316 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 LIFRP42702 1097 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 IST1P53990 364 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CCL7P80098 99 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 NHLH2Q02577 135 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 RUNX1T1Q06455 604 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CST6Q15828 149 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 PFKFB3Q16875 520 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 DEFB133Q30KQ1 61 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 SETMARQ53H47 684 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3GQ6DHY5 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3CQ6IPX1 549 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MB21D2Q8IYB1 491 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBC1D3Q8IZP1 549 aaPredicted RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 IQCKQ8N0W5 287 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TXLNBQ8N3L3 684 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF366Q8N895 744 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 RNF152Q8N8N0 203 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 ST6GALNAC3Q8NDV1 305 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TBCKQ8TEA7 893 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 OVCA2Q8WZ82 227 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MARS2Q96GW9 593 aaKnown RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MNTQ99583 582 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 BARD1Q99728 777 aaKnown RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 SMOQ99835 787 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 SMR3AQ99954 134 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 CRB3Q9BUF7 120 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 KIFC3Q9BVG8 833 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 DDA1Q9BW61 102 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 TLR10Q9BXR5 811 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 SLC2A11Q9BYW1 496 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 LRRN3Q9H3W5 708 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MRPL40Q9NQ50 206 aaKnown RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 LUZP4Q9P127 313 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 XPR1Q9UBH6 696 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 LSM7Q9UK45 103 aaKnown RBP7.02□□□□□ -1.29
NEDD8-203ENST00000524927 GTF3C4Q9UKN8 822 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 MYRFQ9Y2G1 1151 aa7.02□□□□□ -1.29
NEDD8-203ENST00000524927 LOC101059948A0A1B0GTJ6 334 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ZSCAN5CA6NGD5 496 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 E7EWF7 191 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 E9PLN8 166 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 MID1O15344 667 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 THAP12O43422 761 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 MT-ND5P03915 603 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ANXA2P07355 339 aaKnown RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 CLTAP09496 248 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 IRF1P10914 325 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 GCSHP23434 173 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TAF6P49848 677 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 CDK18Q07002 472 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 PIGFQ07326 219 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF844Q08AG5 666 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ABHD18Q0P651 414 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TRIM14Q14142 442 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 PTK2BQ14289 1009 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 SNX30Q5VWJ9 437 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TMEM215Q68D42 235 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 CWC27Q6UX04 472 aaKnown RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 C4orf50Q6ZRC1 276 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 RNF44Q7L0R7 432 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TRIM69Q86WT6 500 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 CATSPER3Q86XQ3 398 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 SYTL1Q8IYJ3 562 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 SDR16C5Q8N3Y7 309 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ZNF808Q8N4W9 903 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 ITLN2Q8WWU7 325 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 TMEM158Q8WZ71 300 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 C18orf12Q96KH6 178 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 IFT74Q96LB3 600 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 HSD17B14Q9BPX1 270 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 VKORC1Q9BQB6 163 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 SLC25A23Q9BV35 468 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 CALN1Q9BXU9 219 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 WDR12Q9GZL7 423 aaKnown RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 MS4A7Q9GZW8 240 aaPredicted RBP7.01□□□□□ -1.29
NEDD8-203ENST00000524927 KCNMB3Q9NPA1 279 aa7.01□□□□□ -1.29
NEDD8-203ENST00000524927 DDX25Q9UHL0 483 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms