RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GAGE12IP0CL82 117 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CSRP1P21291 193 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 GPR12P47775 334 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 VEGFCP49767 419 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 FUT6P51993 359 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 STARD6P59095 220 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 AP2B1P63010 937 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 TNFAIP2Q03169 654 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 TROAPQ12815 778 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ZNF155Q12901 538 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 GAGE1Q13065 139 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GAGE4Q13068 117 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CHAF1AQ13111 956 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 DMP1Q13316 513 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 GPM6BQ13491 265 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 THOC5Q13769 683 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 CCDC6Q16204 474 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ATPAF1Q5TC12 328 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 PMS2CLQ68D20 193 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GJB7Q6PEY0 223 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 LRRC8DQ7L1W4 858 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ARMCX2Q7L311 632 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 SRLQ86TD4 932 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 EXOC3L1Q86VI1 746 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 MON1AQ86VX9 555 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 TICAM2Q86XR7 235 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 PALB2Q86YC2 1186 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GMCL1P1Q8NEA9 526 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 GDPD5Q8WTR4 605 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 AFG1LQ8WV93 481 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 STAMQ92783 540 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 KTI12Q96EK9 354 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 KLHL5Q96PQ7 755 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 CLSTN3Q9BQT9 956 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 WDR12Q9GZL7 423 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 TWSG1Q9GZX9 223 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 S1PR5Q9H228 398 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 RPAP3Q9H6T3 665 aaPredicted RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 ELAC1Q9H777 363 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 ZNF696Q9H7X3 374 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 SLC38A10Q9HBR0 1119 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ARNT2Q9HBZ2 717 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 METTL14Q9HCE5 456 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 TRPV5Q9NQA5 729 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 G6PC2Q9NQR9 355 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 KLHL1Q9NR64 748 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 MAP3K20Q9NYL2 800 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 NDUFAF4Q9P032 175 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 EPS15L1Q9UBC2 864 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 MALT1Q9UDY8 824 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 ADD3Q9UEY8 706 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 GMEB2Q9UKD1 530 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 DLG5Q8TDM6 1919 aa1.69□□□□□ -2.14
CD44-212ENST00000524922 TLN1Q9Y490 2541 aaKnown RBP1.69□□□□□ -2.14
CD44-212ENST00000524922 ASTN1O14525 1302 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ZBED9Q6R2W3 1325 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 WDR19Q8NEZ3 1342 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 KDM3AQ9Y4C1 1321 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NBEAQ8NFP9 2946 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 ITPR3Q14573 2671 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 AK9Q5TCS8 1911 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 PIEZO2Q9H5I5 2752 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SPTBN1Q01082 2364 aaKnown RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 A0A096LPK6 155 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 OR6C68A6NDL8 312 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 H0Y3Z8 333 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 H3BQ06 376 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 HAS3O00219 553 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SYN3O14994 580 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MID1O15344 667 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NCAM2O15394 837 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 HSPA12AO43301 675 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NBNO60934 754 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 FLOT1O75955 427 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 GH2P01242 217 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 APOHP02749 345 aaPredicted RBP1.68□□□□□ -2.14
CD44-212ENST00000524922 SP9P0CG40 484 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TDGF1P13385 188 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 CEACAM1P13688 526 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 HLA-DOBP13765 273 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 GLULP15104 373 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MYOGP15173 224 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 GM2AP17900 193 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 CD53P19397 219 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MYF6P23409 242 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 YWHAQP27348 245 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 SERPINB3P29508 390 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 RYKP34925 604 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 PNPLA4P41247 253 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TECP42680 631 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 NOVP48745 357 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TAF6P49848 677 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 RIPPLY3P57055 190 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 MECOMQ03112 1051 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TCP10Q12799 353 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 PDCLQ13371 301 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 TDGQ13569 410 aa1.68□□□□□ -2.14
CD44-212ENST00000524922 BYSLQ13895 437 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms