RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CD300LGQ6UXG3 332 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 SLC24A5Q71RS6 500 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 Q7L0L9 218 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 KDELC2Q7Z4H8 507 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 C14orf80Q86SX3 495 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 RBM23Q86U06 439 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TTC30AQ86WT1 665 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 BRSK2Q8IWQ3 736 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 DHX40Q8IX18 779 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 C12orf56Q8IXR9 622 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ADGRF3Q8IZF5 1079 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TDHQ8IZJ6 230 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MYOCDQ8IZQ8 938 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 GPD1LQ8N335 351 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TRIML1Q8N9V2 468 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 C7orf57Q8NEG2 295 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 OR5B17Q8NGF7 314 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 NUDCD2Q8WVJ2 157 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 NELFBQ8WX92 580 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 POMGNT1Q8WZA1 660 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 SEPT8Q92599 483 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 INPP5DQ92835 1189 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 P2RX5Q93086 422 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 C18orf25Q96B23 403 aaPredicted RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 BICD1Q96G01 975 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PPP1R10Q96QC0 940 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 GAD1Q99259 594 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 FAM213AQ9BRX8 229 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MSTO1Q9BUK6 570 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 FTHL17Q9BXU8 183 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ELAC1Q9H777 363 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TMEM206Q9H813 350 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PLAC1Q9HBJ0 212 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PDE11AQ9HCR9 933 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 KRCC1Q9NPI7 259 aaPredicted RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 CHST12Q9NRB3 414 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 SAMSN1Q9NSI8 373 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TMEM161AQ9NX61 479 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 DNAJB4Q9UDY4 337 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TUBGCP4Q9UGJ1 667 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MYO6Q9UM54 1294 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 FRYLO94915 3013 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MIA3Q5JRA6 1907 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ACACBO00763 2458 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MYO10Q9HD67 2058 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SMIM28A0A1B0GU29 152 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 LINC01553A4QN01 128 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CASTOR2A6NHX0 329 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 C3orf70A6NLC5 250 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 H0YCG3 227 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 HCRTO43612 131 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 EXTL3O43909 919 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NFATC1O95644 943 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NDST3O95803 873 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NR3C1P04150 777 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CA3P07451 260 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ITGA5P08648 1049 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TRIM49P0CI25 452 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TRIM49CP0CI26 452 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SRGAP2BP0DMP2 458 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ACTN1P12814 892 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ATP1A3P13637 1013 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 KCNE1P15382 129 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF18P17022 549 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 IGFBP2P18065 325 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NR2F2P24468 414 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 DNAJB1P25685 340 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MATR3P43243 847 aaKnown RBP eCLIP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SLC11A1P49279 550 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CLCNKBP51801 687 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CYP24A1Q07973 514 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 DSC1Q08554 894 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 ALCAMQ13740 583 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CAMK1Q14012 370 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 STX1AQ16623 288 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 EDRF1Q3B7T1 1238 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CBWD6Q4V339 395 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CBWD3Q5JTY5 395 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CBWD5Q5RIA9 395 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NADSYN1Q6IA69 706 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 JADE1Q6IE81 842 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 C15orf39Q6ZRI6 1047 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TRILQ7L0X0 811 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 LUZP1Q86V48 1076 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 RASGRP3Q8IV61 690 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 HERC6Q8IVU3 1022 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 RNF168Q8IYW5 571 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SYCP3Q8IZU3 236 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 EXD3Q8N9H8 876 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 MLKLQ8NB16 471 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 GLIS1Q8NBF1 620 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 XXYLT1Q8NBI6 393 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 PARD3BQ8TEW8 1205 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 NOC3LQ8WTT2 800 aaKnown RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 SEMA4DQ92854 862 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 TIFAQ96CG3 184 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC51Q96ER9 411 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 DHTKD1Q96HY7 919 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-208ENST00000524652 B3GALT6Q96L58 329 aa3.09□□□□□ -1.91
CSDE1-208ENST00000524652 CNOT6LQ96LI5 555 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms