RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PLGRKTQ9HBL7 147 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 RNF186Q9NXI6 227 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 TMEM9Q9P0T7 183 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 TNPO3Q9Y5L0 923 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 ZFC3H1O60293 1989 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 VWA8A3KMH1 1905 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 FAM149AA5PLN7 773 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 H7C0S8 307 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CDC7O00311 574 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 EI24O14681 340 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 GJB3O75712 270 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 TSPAN12O95859 305 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 NELFEP18615 380 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 CR2P20023 1033 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CHRM3P20309 590 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 DCKP27707 260 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 PTPRNQ16849 979 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 PAGE3Q5JUK9 113 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 KIAA2013Q8IYS2 634 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 LGI2Q8N0V4 545 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 FAM110BQ8TC76 370 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 BPIFB1Q8TDL5 484 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CYGBQ8WWM9 190 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 RMDN1Q96DB5 314 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 PDLIM5Q96HC4 596 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 CEP295NLQ96MC4 621 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 RDH12Q96NR8 316 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 TDRD1Q9BXT4 1180 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 ADGRE3Q9BY15 652 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 A0A0J9YVX5 310 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 E2F3O00716 465 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 MAGEB3O15480 346 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 B4GALT3O60512 393 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 C1RP00736 705 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 ESR1P03372 595 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 COL6A1P12109 1028 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 OR1G1P47890 313 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CDH15P55291 814 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 OXCT1P55809 520 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 RAB15P59190 212 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 UFM1P61960 85 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 ADARB1P78563 741 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 FAM189BP81408 668 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 SMU1Q2TAY7 513 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 RABL3Q5HYI8 236 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CLLU1OSQ5K130 101 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 C6orf136Q5SQH8 315 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CCNYL2Q5T2Q4 361 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 CCSAPQ6IQ19 270 aaPredicted RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 CLVS1Q8IUQ0 354 aaPredicted RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 RNF168Q8IYW5 571 aaPredicted RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 LRRC43Q8N309 656 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 KLHDC9Q8NEP7 349 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 POP5Q969H6 163 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 VPS33AQ96AX1 596 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 FAM193BQ96PV7 902 aaPredicted RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 ZNF225Q9UK10 706 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 IKZF3Q9UKT9 509 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 TDRKHQ9Y2W6 561 aaKnown RBP8.22□□□□□ -1.09
CHD7-202ENST00000524602 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 SPO11Q9Y5K1 396 aa8.22□□□□□ -1.09
CHD7-202ENST00000524602 A0A1B0GTL3 188 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 TRIM64BA6NI03 449 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 ACSL4O60488 711 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 TPST1O60507 370 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 PRSS23O95084 383 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 ALDH1A1P00352 501 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 HPRP00739 348 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 HMBSP08397 361 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 PIRTP0C851 137 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 MTHFD1P11586 935 aaKnown RBP8.21□□□□□ -1.09
CHD7-202ENST00000524602 HOXB6P17509 224 aaKnown RBP8.21□□□□□ -1.09
CHD7-202ENST00000524602 MSH3P20585 1137 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.09
CHD7-202ENST00000524602 PTGER3P43115 390 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 PCBP2Q15366 365 aaKnown RBP eCLIP8.21□□□□□ -1.094e-7■■■■□ 25
CHD7-202ENST00000524602 IL31Q6EBC2 164 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 RNF165Q6ZSG1 346 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 RIMKLAQ8IXN7 391 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 CARNMT1Q8N4J0 409 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 FNDC5Q8NAU1 212 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 MDGA1Q8NFP4 955 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 OR8J3Q8NGG0 315 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 PROKR1Q8TCW9 393 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 CD200R1Q8TD46 325 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 BIRC7Q96CA5 298 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 TEX37Q96LM6 180 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 NSMCE2Q96MF7 247 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 CCDC115Q96NT0 180 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 TRMT13Q9NUP7 481 aaKnown RBP8.21□□□□□ -1.09
CHD7-202ENST00000524602 CD274Q9NZQ7 290 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 ST14Q9Y5Y6 855 aa8.21□□□□□ -1.09
CHD7-202ENST00000524602 ILVBLA1L0T0 632 aa8.21□□□□□ -1.1
CHD7-202ENST00000524602 SYNCRIPO60506 623 aaKnown RBP8.21□□□□□ -1.1
CHD7-202ENST00000524602 TLR5O60602 858 aa8.21□□□□□ -1.1
CHD7-202ENST00000524602 DEAF1O75398 565 aaPredicted RBP8.21□□□□□ -1.1
CHD7-202ENST00000524602 CLDN11O75508 207 aa8.21□□□□□ -1.1
CHD7-202ENST00000524602 UGT1A6P19224 532 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms