RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 GPR78Q96P69 363 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TMEM237Q96Q45 408 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 MCCC1Q96RQ3 725 aaPredicted RBP7.02□□□□□ -1.29
VPS11-201ENST00000524454 TTC1Q99614 292 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 OMDQ99983 421 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 GPR174Q9BXC1 333 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CDH19Q9H159 772 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SYTL2Q9HCH5 934 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 NCKIPSDQ9NZQ3 722 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TMEM216Q9P0N5 145 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 KLHL42Q9P2K6 505 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 VTI1BQ9UEU0 232 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SLC2A6Q9UGQ3 507 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 LNPEPQ9UIQ6 1025 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 APPL1Q9UKG1 709 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SLC39A10Q9ULF5 831 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PKP3Q9Y446 797 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PCDHB9Q9Y5E1 797 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 PCDHB1Q9Y5F3 818 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 SLCO1B1Q9Y6L6 691 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 CFAP54Q96N23 3096 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 TMEM131Q92545 1883 aa7.02□□□□□ -1.29
VPS11-201ENST00000524454 MYLKQ15746 1914 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 NUMA1Q14980 2115 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 FAM186AA6NE01 2351 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 PCDH15Q96QU1 1955 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 A0A0J9YYE9 177 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 DCDC2BA2VCK2 349 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 RGSL1A5PLK6 1076 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 CAPN8A6NHC0 703 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 AGAP14A8MT82 685 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 K7ERQ8 282 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 EIF3FO00303 357 aaPredicted RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 PLK4O00444 970 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 NDUFS2O75306 463 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 MT-CO1P00395 513 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TRBC1P01850 177 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ESR1P03372 595 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 PYGLP06737 847 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 SRPRAP08240 638 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 LTA4HP09960 611 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 ZNF806P0C7X5 589 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ACADMP11310 421 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TIMP2P16035 220 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ZNF30P17039 623 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 RPS3P23396 243 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS11-201ENST00000524454 CD6P30203 668 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ADSLP30566 484 aaPredicted RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 RGRP47804 291 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 PSMD8P48556 350 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 SLC1A6P48664 564 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 MNAT1P51948 309 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ARFIP2P53365 341 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TAS2R39P59534 338 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ABCE1P61221 599 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 POLR2LP62875 67 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 BCL2L1Q07817 233 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TRAF2Q12933 501 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 PRKAA1Q13131 559 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 CTBP1Q13363 440 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ACCSLQ4AC99 568 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 HECTD2Q5U5R9 776 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LYSMD4Q5XG99 296 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LRRC8EQ6NSJ5 796 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 METTL2BQ6P1Q9 378 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 BRAT1Q6PJG6 821 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LINGO4Q6UY18 593 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 CLNKQ7Z7G1 428 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 CMC1Q7Z7K0 106 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 MMAAQ8IVH4 418 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 DENND6AQ8IWF6 608 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TMEM151AQ8N4L1 468 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 NKAPQ8N5F7 415 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 OR2I1PQ8NGU4 316 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 OR6P1Q8NGX9 317 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 OR2T3Q8NH03 318 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 CFAP61Q8NHU2 1237 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 BLOC1S5Q8TDH9 187 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 GANCQ8TET4 914 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LPGAT1Q92604 370 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LOXL4Q96JB6 756 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ELMO2Q96JJ3 720 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 FAR2Q96K12 515 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 DNAJC1Q96KC8 554 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 RMDN2Q96LZ7 410 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 PLEKHG4BQ96PX9 1271 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 AARSD1Q9BTE6 412 aaKnown RBP7.01□□□□□ -1.29
VPS11-201ENST00000524454 OSBPL1AQ9BXW6 950 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 DRC3Q9H069 523 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 MYLK2Q9H1R3 596 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 LRMDAQ9H2I8 198 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 RABEP2Q9H5N1 569 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 NPHS2Q9NP85 383 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 ABCF3Q9NUQ8 709 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 DNAJC28Q9NX36 388 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 TAS2R13Q9NYV9 303 aa7.01□□□□□ -1.29
VPS11-201ENST00000524454 IL17CQ9P0M4 197 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms