RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 LINC00032P0C843 101 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 GKP32189 559 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 MSX2P35548 267 aaPredicted RBP13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 HNF1BP35680 557 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 HK3P52790 923 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 POLE2P56282 527 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 TRAP1Q12931 704 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 NFATC2Q13469 925 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 FBXO48Q5FWF7 155 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PITRM1Q5JRX3 1037 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 ARPINQ7Z6K5 226 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 ADAMTSL2Q86TH1 951 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 SYVN1Q86TM6 617 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PHYKPLQ8IUZ5 450 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 RNF148Q8N7C7 305 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 SNX31Q8N9S9 440 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 KLHL23Q8NBE8 558 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 OR2AP1Q8NGE2 309 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 OR9I1Q8NGQ6 314 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 NCSTNQ92542 709 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PKP2Q99959 881 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 HGH1Q9BTY7 390 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 TRIM4Q9C037 500 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 TUBB1Q9H4B7 451 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 EPB41L1Q9H4G0 881 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 ASB8Q9H765 288 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 PFDN4Q9NQP4 134 aa13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 EIF2B4Q9UI10 523 aaKnown RBP13.61□□□□□ -0.23
LDLRAD3-202ENST00000524419 GLYATL1P3A0A0U1RQE8 302 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SMIM31A0A1B0GVY4 71 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 NR5A2O00482 541 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 CLDN7O95471 211 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 ESRRBO95718 433 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 C8BP07358 591 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 UROSP10746 265 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SPAM1P38567 509 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SNRPD1P62314 119 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GRB7Q14451 532 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GPRIN3Q6ZVF9 776 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 LILRA2Q8N149 483 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 PCYOX1LQ8NBM8 494 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 RIN3Q8TB24 985 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 EMILIN2Q9BXX0 1053 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SLC46A2Q9BY10 475 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SPAG4Q9NPE6 437 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 CRLS1Q9UJA2 301 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 CROTQ9UKG9 612 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 INTS6Q9UL03 887 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 EME2A4GXA9 379 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 E7ENX8 843 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 NRG2O14511 850 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 TRIM24O15164 1050 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 ZNF821O75541 412 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GLUD1P00367 558 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SRCP12931 536 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 HGFP14210 728 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 ACRV1P26436 265 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GSTT1P30711 240 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 RGS4P49798 205 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 RPS6KA2Q15349 733 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 TGFBIQ15582 683 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 DGKKQ5KSL6 1271 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 PRPF38BQ5VTL8 546 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 GRAMD4Q6IC98 578 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 C22orf39Q6P5X5 142 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SPATA19Q7Z5L4 167 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 TMEM102Q8N9M5 508 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 ROPN1LQ96C74 230 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 DUS3LQ96G46 650 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 ZNF382Q96SR6 550 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 IL26Q9NPH9 171 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 SLC25A13Q9UJS0 675 aa13.6□□□□□ -0.23
LDLRAD3-202ENST00000524419 TRBV5-4A0A0C4DH59 114 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 H0YJX3 145 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 IDO1P14902 403 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 BPIP17213 487 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 GRIA2P42262 883 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 CTSOP43234 321 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 STK19P49842 368 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 NME5P56597 212 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 CDKN3Q16667 212 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 GPR33Q49SQ1 333 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 FUNDC1Q8IVP5 155 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 MYO1HQ8N1T3 1032 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 SLC22A17Q8WUG5 538 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms