RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OLFM3Q96PB7 478 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 RUFY1Q96T51 708 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 EFHD1Q9BUP0 239 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 UGT1A7Q9HAW7 530 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 UGT1A10Q9HAW8 530 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 UGT1A8Q9HAW9 530 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 FAM8A1Q9UBU6 413 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 PLAAQ9Y263 795 aa15.16■□□□□ 0.02
MRPS28-209ENST00000522987 A0A0A6YYK5 440 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 PRR19A6NJB7 356 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 DDX3YO15523 660 aaKnown RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 ANKRD34CP0C6C1 535 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 PECAM1P16284 738 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 NFKB1P19838 968 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 IDSP22304 550 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 PTPN3P26045 913 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 CASRP41180 1078 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 CLCNKAP51800 687 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 TMEM115Q12893 351 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 GTF2H3Q13889 308 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 ASTE1Q2TB18 679 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 LACTB2Q53H82 288 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 FAM151BQ6UXP7 276 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 CERS6Q6ZMG9 384 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 TIMM29Q9BSF4 260 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 TRIT1Q9H3H1 467 aaKnown RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 EPB41L1Q9H4G0 881 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 ZNF768Q9H5H4 540 aaKnown RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 TUBD1Q9UJT1 453 aa15.15■□□□□ 0.02
MRPS28-209ENST00000522987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.15■□□□□ 0.028e-8■■□□□ 11.5
MRPS28-209ENST00000522987 CFAP20Q9Y6A4 193 aaKnown RBP15.15■□□□□ 0.02
MRPS28-209ENST00000522987 OR2AG2A6NM03 316 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
MRPS28-209ENST00000522987 CD68P34810 354 aaPredicted RBP15.14■□□□□ 0.01
MRPS28-209ENST00000522987 CAPZBP47756 277 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 CTSCP53634 463 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 FOXK1P85037 733 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 MC1RQ01726 317 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 PTPRCAPQ14761 206 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 CHRNA6Q15825 494 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 TEX44Q53QW1 395 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 DUS1LQ6P1R4 473 aaKnown RBP15.14■□□□□ 0.01
MRPS28-209ENST00000522987 FAM83HQ6ZRV2 1179 aaPredicted RBP15.14■□□□□ 0.01
MRPS28-209ENST00000522987 DET1Q7L5Y6 550 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 C11orf96Q7Z7L8 435 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 AVL9Q8NBF6 648 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 BLOC1S5Q8TDH9 187 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 TADA1Q96BN2 335 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 IQCDQ96DY2 449 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 TTC25Q96NG3 672 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 GOLPH3Q9H4A6 298 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 AKIRIN1Q9H9L7 192 aaPredicted RBP15.14■□□□□ 0.01
MRPS28-209ENST00000522987 UCK1Q9HA47 277 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 SLC40A1Q9NP59 571 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 RAD18Q9NS91 495 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 POT1Q9NUX5 634 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 PCDHB3Q9Y5E6 796 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 KCNMB2Q9Y691 235 aa15.14■□□□□ 0.01
MRPS28-209ENST00000522987 PIKFYVEQ9Y2I7 2098 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 IGHV5-51A0A0C4DH38 117 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 MTSS1O43312 755 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 VEGFDO43915 354 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 SPAG6O75602 509 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 DNAJB5O75953 348 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 FOLR1P15328 257 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 ARCN1P48444 511 aaKnown RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 WNT3AP56704 352 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 RPS18P62269 152 aaKnown RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 SRSF1Q07955 248 aaKnown RBP eCLIP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 ADCY2Q08462 1091 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 SEPT6Q14141 434 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 NFE2L1Q14494 772 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 SIRPB2Q5JXA9 342 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 PDPK2PQ6A1A2 396 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 FAM199XQ6PEV8 388 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 ABRAXAS1Q6UWZ7 409 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 BEND7Q8N7W2 519 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 RASGEF1AQ8N9B8 481 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 OR8K1Q8NGG5 319 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 CT55Q8WUE5 264 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 TWSG1Q9GZX9 223 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 C10orf88Q9H8K7 445 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 NFKBIL1Q9UBC1 381 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-209ENST00000522987 ANAPC2Q9UJX6 822 aa15.13■□□□□ 0.01
MRPS28-209ENST00000522987 PIPSLA2A3N6 862 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 GPR89AB7ZAQ6 455 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 SPOPO43791 374 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 CST8O60676 142 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 POP7O75817 140 aaKnown RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 NTRK1P04629 796 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 EBLN1P0CF75 366 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 GPR89BP0CG08 455 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 ZFXP17010 805 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 COMTP21964 271 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 HALP42357 657 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 MLLT10P55197 1068 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 CHAF1BQ13112 559 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms