RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 B3GNT4Q9C0J1 378 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 CDH19Q9H159 772 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 MS4A5Q9H3V2 200 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 GPN2Q9H9Y4 310 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM8AQ9HCN3 771 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 PCDH12Q9NPG4 1184 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 PRDM8Q9NQV8 689 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ERRFI1Q9UJM3 462 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 ADAM29Q9UKF5 820 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 VANGL2Q9ULK5 521 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 PCDHGA3Q9Y5H0 932 aa6.36□□□□□ -1.39
VPS13B-211ENST00000522802 MRPS18BQ9Y676 258 aaKnown RBP6.36□□□□□ -1.39
VPS13B-211ENST00000522802 A0A0D9SEW6 157 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 MROH6A6NGR9 719 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 M0QYT0 321 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 KLRC4O43908 158 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CUTAO60888 179 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 ALPIP09923 528 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CSF2RBP32927 897 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 MXI1P50539 228 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CCNHP51946 323 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 MAZP56270 477 aaKnown RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 OR1D5P58170 312 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 B4GALNT1Q00973 533 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CCDC15Q0P6D6 951 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 HLTFQ14527 1009 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 EIF2S3LQ2VIR3 472 aaKnown RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 C14orf28Q4W4Y0 310 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 ANKS6Q68DC2 871 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM200BQ69YZ2 307 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TCTN3Q6NUS6 607 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 LVRNQ6Q4G3 990 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 LCLAT1Q6UWP7 414 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM135Q86UB9 458 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 BCL6BQ8N143 479 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 DCAF4L2Q8NA75 395 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CCDC150Q8NCX0 1101 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 ATL2Q8NHH9 583 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 RNF31Q96EP0 1072 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 FEM1CQ96JP0 617 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TAAR9Q96RI9 348 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 WRAP53Q9BUR4 548 aaKnown RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 DDA1Q9BW61 102 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 CUEDC2Q9H467 287 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 POFUT1Q9H488 388 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 ZDHHC6Q9H6R6 413 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 BARX1Q9HBU1 254 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-211ENST00000522802 DONSONQ9NYP3 566 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM9Q9P0T7 183 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 LRIT1Q9P2V4 623 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 MCM8Q9UJA3 840 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 KCND3Q9UK17 655 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 PILRAQ9UKJ1 303 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 SMC3Q9UQE7 1217 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 TBC1D30Q9Y2I9 924 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 ACTL7AQ9Y615 435 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 DOCK4Q8N1I0 1966 aa6.35□□□□□ -1.39
VPS13B-211ENST00000522802 PCNX1Q96RV3 2341 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 MED13LQ71F56 2210 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SYNJ2BP-COX16A0A087WUM0 186 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 A0A0G2JNJ9 132 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TCP11X1B4DZS4 312 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 MKRN2OSH3BPM6 223 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 PDXKO00764 312 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 PRRG2O14669 202 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 B4GAT1O43505 415 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TSPAN6O43657 245 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 DNAJB5O75953 348 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SORBS2O94875 1100 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CPNE6O95741 557 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 DDAH2O95865 285 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TRUB2O95900 331 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 RHOCP08134 193 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CTSEP14091 401 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 PDCP20941 246 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 NR2F2P24468 414 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SRP54P61011 504 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 YPEL5P62699 121 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 ADCY2Q08462 1091 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 EIF4EBP2Q13542 120 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CUL2Q13617 745 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SLC39A14Q15043 492 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 KRTAP21-3Q3LHN1 58 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 NADK2Q4G0N4 442 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CBWD6Q4V339 395 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 ALFQ53S48 1182 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CBWD3Q5JTY5 395 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 CBWD5Q5RIA9 395 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 PRAMEF9Q5VWM5 478 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SPECC1LQ69YQ0 1117 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 KRT39Q6A163 491 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 FOXR2Q6PJQ5 311 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 SHC4Q6S5L8 630 aa6.34□□□□□ -1.39
VPS13B-211ENST00000522802 INTS8Q75QN2 995 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TIPARPQ7Z3E1 657 aaKnown RBP6.34□□□□□ -1.39
VPS13B-211ENST00000522802 TFAP2DQ7Z6R9 452 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms