RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TCEA3O75764 348 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 POP7O75817 140 aaKnown RBP17.56■□□□□ 0.4
CLK4-211ENST00000522556 TMEM63AO94886 807 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 HOXB3P14651 431 aaPredicted RBP17.56■□□□□ 0.4
CLK4-211ENST00000522556 PNLIPP16233 465 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 MSH3P20585 1137 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 ITGALP20701 1170 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 PSMA3P25788 255 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 CD1CP29017 333 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 FOXN2P32314 431 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 FASLGP48023 281 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 CLCNKAP51800 687 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 SESN2P58004 480 aaPredicted RBP17.56■□□□□ 0.4
CLK4-211ENST00000522556 GNG11P61952 73 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 GABREP78334 506 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 PDE1BQ01064 536 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 HHEXQ03014 270 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 RTP5Q14D33 572 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 DBN1Q16643 649 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 ZRANB3Q5FWF4 1079 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 SNX20Q7Z614 316 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 SERPINA9Q86WD7 417 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 ACTRT1Q8TDG2 376 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 TTC25Q96NG3 672 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 NRSN2Q9GZP1 204 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 SEMA6CQ9H3T2 930 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 EIF2B3Q9NR50 452 aaKnown RBP17.56■□□□□ 0.4
CLK4-211ENST00000522556 RAXQ9Y2V3 346 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 AK5Q9Y6K8 562 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 PIKFYVEQ9Y2I7 2098 aa17.56■□□□□ 0.4
CLK4-211ENST00000522556 KMT2BQ9UMN6 2715 aaPredicted RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 IGHV1OR21-1A0A087WYE8 117 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 TMEM8BA6NDV4 472 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 SRRM3A6NNA2 597 aaPredicted RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 PHF2O75151 1096 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 KRT14P02533 472 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 HGFP14210 728 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 MPSTP25325 297 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 MSNP26038 577 aaKnown RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 HADHAP40939 763 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 SLC19A1P41440 591 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 UBE2IP63279 158 aaKnown RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 CCDC173Q0VFZ6 552 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 GPS1Q13098 491 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 BIRC2Q13490 618 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 SEMA3AQ14563 771 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 KCNJ11Q14654 390 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 CLCA4Q14CN2 919 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 TSTD2Q5T7W7 516 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 CCDC137Q6PK04 289 aaKnown RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 ZNF574Q6ZN55 896 aaPredicted RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 SLITRK4Q8IW52 837 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 GPR150Q8NGU9 434 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 PRR11Q96HE9 360 aaPredicted RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 CAPZA3Q96KX2 299 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 TRIM56Q9BRZ2 755 aaKnown RBP17.55■□□□□ 0.4
CLK4-211ENST00000522556 TBC1D10AQ9BXI6 508 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 PSMD13Q9UNM6 376 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 TCAF1Q9Y4C2 921 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 SLC30A1Q9Y6M5 507 aa17.55■□□□□ 0.4
CLK4-211ENST00000522556 IGLV3-16A0A075B6K0 115 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 GOT2P00505 430 aaKnown RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 ACRV1P26436 265 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 MGAT1P26572 445 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 DUS1LQ6P1R4 473 aaKnown RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 FOXR1Q6PIV2 292 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 TAS2R42Q7RTR8 314 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 CLDN19Q8N6F1 224 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 JPH3Q8WXH2 748 aaPredicted RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 HDAC10Q969S8 669 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 ULK4Q96C45 1275 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 RANBP9Q96S59 729 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 ZCCHC2Q9C0B9 1178 aaKnown RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 DDX47Q9H0S4 455 aaKnown RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 SARS2Q9NP81 518 aaKnown RBP17.54■□□□□ 0.4
CLK4-211ENST00000522556 HOMER3Q9NSC5 361 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 SYBUQ9NX95 663 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 KCNK4Q9NYG8 393 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 CPNE7Q9UBL6 633 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 PRSS21Q9Y6M0 314 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 CELSR3Q9NYQ7 3312 aa17.54■□□□□ 0.4
CLK4-211ENST00000522556 ZZEF1O43149 2961 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 HEATR9A2RTY3 570 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 AVILO75366 819 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 NMBRP28336 390 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 MAPK9P45984 424 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 INHBCP55103 352 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 ACVR1Q04771 509 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 ZFP36L1Q07352 338 aaKnown RBP17.53■□□□□ 0.4
CLK4-211ENST00000522556 DMPKQ09013 629 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 C16orf72Q14CZ0 275 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 BCL7AQ4VC05 210 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 CES3Q6UWW8 571 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 ABRAXAS1Q6UWZ7 409 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 AMZ2Q86W34 360 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
CLK4-211ENST00000522556 RCBTB1Q8NDN9 531 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms