RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 POLR3FQ9H1D9 316 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TNMDQ9H2S6 317 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 GOLPH3LQ9H4A5 285 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 C17orf75Q9HAS0 396 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 MAGEF1Q9HAY2 307 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 SAYSD1Q9NPB0 183 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PRDM8Q9NQV8 689 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 XPNPEP1Q9NQW7 623 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TMEM248Q9NWD8 314 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 KCND2Q9NZV8 630 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 LUZP4Q9P127 313 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 DAPP1Q9UN19 280 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 PCDHGB3Q9Y5G1 929 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 TRPV2Q9Y5S1 764 aa3.35□□□□□ -1.87
VPS13B-209ENST00000521559 A0A1B0GVT2 93 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PVALEFA0A1B0GWK0 134 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 BECN2A8MW95 431 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 M0QZ92 97 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 LIASO43766 372 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 HEXIM1O94992 359 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 VTNP04004 478 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 LCATP04180 440 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 UNGP13051 313 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 DARSP14868 501 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GAP43P17677 238 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 ITGB8P26012 769 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 HOXA11P31270 313 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 RFC2P35250 354 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 NAMPTP43490 491 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GPC3P51654 580 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 CLCNKBP51801 687 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 RPS6KA3P51812 740 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF131P52739 623 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 CCL23P55773 120 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PEX3P56589 373 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 DSCR9P59020 149 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 NLRP11P59045 1033 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PTENP60484 403 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 ZBTB16Q05516 673 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 MGAT3Q09327 533 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 Q0VFX4 171 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PPIGQ13427 754 aaKnown RBP eCLIP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 BIRC3Q13489 604 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 TFDP1Q14186 410 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 LPIN1Q14693 890 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GPNMBQ14956 572 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GXYLT1Q4G148 440 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 MTFR2Q6P444 385 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 KRBA2Q6ZNG9 492 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC65Q8IXS2 484 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 DAW1Q8N136 415 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PTGR2Q8N8N7 351 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 LRRC57Q8N9N7 239 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 RNF149Q8NC42 400 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 CNNM3Q8NE01 707 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 HDAC7Q8WUI4 952 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 STAMQ92783 540 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 KCNJ9Q92806 393 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 BADQ92934 168 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 ARRDC3Q96B67 414 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC34Q96HJ3 373 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 IFT74Q96LB3 600 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 TRAPPC9Q96Q05 1148 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GFM1Q96RP9 751 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 LBHD1Q9BQE6 289 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 REEP2Q9BRK0 252 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 FAM167BQ9BTA0 163 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 HDHD5Q9BXW7 423 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 NFKBIZQ9BYH8 718 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GCOM2Q9BZD3 368 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 TRIM9Q9C026 710 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 C2orf40Q9H1Z8 148 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PABPC3Q9H361 631 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 KLHL31Q9H511 634 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 C6orf106Q9H6K1 298 aaPredicted RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 PARVGQ9HBI0 331 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 POLD4Q9HCU8 107 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 Q9N2J8 555 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 GRHPRQ9UBQ7 328 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 HOOK1Q9UJC3 728 aaKnown RBP3.34□□□□□ -1.87
VPS13B-209ENST00000521559 ODF2LQ9ULJ1 636 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 UMODL1Q5DID0 1318 aa3.34□□□□□ -1.87
VPS13B-209ENST00000521559 SMCHD1A6NHR9 2005 aa3.34□□□□□ -1.88
VPS13B-209ENST00000521559 LRRC37A2A6NM11 1700 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 MGAMO43451 1857 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 LCTP09848 1927 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 FRMD3A2A2Y4 597 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 LRRIQ4A6NIV6 560 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC169A6NNP5 214 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 H0YCG3 227 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 K7ERI5 159 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SLC16A4O15374 487 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 KINO60870 393 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 TBCAO75347 108 aaKnown RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 RPS6KA5O75582 802 aa3.33□□□□□ -1.88
VPS13B-209ENST00000521559 PAPSS2O95340 614 aaPredicted RBP3.33□□□□□ -1.88
VPS13B-209ENST00000521559 SMC2O95347 1197 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms