RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 TMEM63AO94886 807 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 TIAF1O95411 115 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 PRLP01236 227 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 JCHAINP01591 159 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 PIRTP0C851 137 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 IL4RP24394 825 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 HSD11B2P80365 405 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 MRPL49Q13405 166 aaKnown RBP11.28□□□□□ -0.6
MRPS28-206ENST00000520946 KRT33BQ14525 404 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 PCSK7Q16549 785 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 STX1AQ16623 288 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 KYNUQ16719 465 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 TXNRD3NBQ6F5E7 133 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 JMJD6Q6NYC1 403 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-206ENST00000520946 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-206ENST00000520946 KMT5CQ86Y97 462 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 HPS6Q86YV9 775 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 ARRDC2Q8TBH0 407 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 BRSK1Q8TDC3 778 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 MAML1Q92585 1016 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-206ENST00000520946 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 RAB33BQ9H082 229 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 KCND1Q9NSA2 647 aa11.28□□□□□ -0.6
MRPS28-206ENST00000520946 CACNA1DQ01668 2161 aa11.27□□□□□ -0.6
MRPS28-206ENST00000520946 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 DDX3XO00571 662 aaKnown RBP eCLIP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 CHUKO15111 745 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 KCNJ13O60928 360 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 SKILP12757 684 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 FECHP22830 423 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 COL8A1P27658 744 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 PTGIRP43119 386 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 GSDMDP57764 484 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TUBB4BP68371 445 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 PRKAA1Q13131 559 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 XRCC4Q13426 336 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TUBB2AQ13885 445 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 NAA30Q147X3 362 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 PDK2Q15119 407 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 CCDC183Q5T5S1 534 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 AGAP9Q5VTM2 703 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 NCBP2-AS2Q69YL0 99 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 ALG1LQ6GMV1 187 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 WASH2PQ6VEQ5 465 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 AMZ2Q86W34 360 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 OOSP2Q86WS3 158 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 GPR26Q8NDV2 337 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 OR8K5Q8NH50 307 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 CPT1BQ92523 772 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 SGSM3Q96HU1 749 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 SLC41A2Q96JW4 573 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TSGA13Q96PP4 275 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 SRPK1Q96SB4 655 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 RUFY1Q96T51 708 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 CD180Q99467 661 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 MAP3K3Q99759 626 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TUBB2BQ9BVA1 445 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 NAT10Q9H0A0 1025 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 CBX8Q9HC52 389 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 MAGEE1Q9HCI5 957 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 IMP3Q9NV31 184 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 HRASLS2Q9NWW9 162 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 GPR83Q9NYM4 423 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 ZNF711Q9Y462 761 aa11.27□□□□□ -0.61
MRPS28-206ENST00000520946 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
MRPS28-206ENST00000520946 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 TLCD2A6NGC4 264 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 KCNK1O00180 336 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 SORBS2O94875 1100 aaKnown RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 CD48P09326 243 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 BRAFP15056 766 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 LPOP22079 712 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 PBLDP30039 288 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 DCDC1P59894 354 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 SLC25A11Q02978 314 aaKnown RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 AP1B1Q10567 949 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 TMEM115Q12893 351 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 GSE1Q14687 1217 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 GPR19Q15760 415 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 PRR30Q53SZ7 412 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 MED25Q71SY5 747 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 NT5DC3Q86UY8 548 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 IQCKQ8N0W5 287 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 NIPA2Q8N8Q9 360 aa11.26□□□□□ -0.61
MRPS28-206ENST00000520946 TMEM102Q8N9M5 508 aaPredicted RBP11.26□□□□□ -0.61
MRPS28-206ENST00000520946 FDCSPQ8NFU4 85 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms