RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 SUFUQ9UMX1 484 aa6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 CA5BQ9Y2D0 317 aa6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 SNX11Q9Y5W9 270 aa6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 OAS3Q9Y6K5 1087 aaKnown RBP6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLCO1B1Q9Y6L6 691 aa6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 FAM186AA6NE01 2351 aa6.28□□□□□ -1.4
IGHV4-55-201ENST00000520889 ATXN2Q99700 1313 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 GPR179Q6PRD1 2367 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CCDC189A1A4V9 331 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CCDC78A2IDD5 438 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 MGAT4DA6NG13 374 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 OR51F1A6NGY5 319 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 OR5K4A6NMS3 321 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 LMO7DNF2Z398 122 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CCL22O00626 93 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 LIN7AO14910 233 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SCAMP1O15126 338 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 RIPK2O43353 540 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SGTAO43765 313 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 TCEA3O75764 348 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 PIAS2O75928 621 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ASMTLO95671 621 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 NUDT17P0C025 328 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 MYBL2P10244 700 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CTSEP14091 401 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 PKMP14618 531 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 JUNDP17535 347 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ENGP17813 658 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 EPHA8P29322 1005 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ATP5DP30049 168 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 AKT1P31749 480 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CA5AP35218 305 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 GP5P40197 560 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SLC1A2P43004 574 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 MAPK9P45984 424 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CD151P48509 253 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CDKN1CP49918 316 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SERPINB9P50453 376 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ATXN3P54252 364 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ARHGAP8P85298 464 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SPEM2Q0P670 501 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ILF3Q12906 894 aaKnown RBP eCLIP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 DNAJC3Q13217 504 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 LPAL2Q16609 132 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 KCTD19Q17RG1 926 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 INAVAQ3KP66 663 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ZNF658BQ4V348 819 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 TPRG1LQ5T0D9 272 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 GRTP1Q5TC63 336 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 AGAP9Q5VTM2 703 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 LRRC8EQ6NSJ5 796 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 UGT3A1Q6NUS8 523 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 TRMT10BQ6PF06 316 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 OGFOD3Q6PK18 319 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 TMEM220Q6QAJ8 160 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 PRR23CQ6ZRP0 262 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 KANSL1Q7Z3B3 1105 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 C11orf96Q7Z7L8 435 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CROCCP2Q86T23 111 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 AMZ2Q86W34 360 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ZNF547Q8IVP9 402 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 RASGEF1AQ8N9B8 481 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 FAM181AQ8N9Y4 354 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 OR6C4Q8NGE1 309 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 HM13Q8TCT9 377 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 SAP25Q8TEE9 199 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ZFPM2Q8WW38 1151 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ASZ1Q8WWH4 475 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 OR1E3Q8WZA6 343 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 PDXPQ96GD0 296 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 BIRC8Q96P09 236 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 TRIM56Q9BRZ2 755 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CCM2Q9BSQ5 444 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CCDC68Q9H2F9 335 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 DPEP2Q9H4A9 486 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 RHOJQ9H4E5 214 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 GAREM1Q9H706 876 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 CYP4F12Q9HCS2 524 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 IARS2Q9NSE4 1012 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 MARCH4Q9P2E8 410 aaPredicted RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 APOBEC3BQ9UH17 382 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 RABGEF1Q9UJ41 708 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ZNF180Q9UJW8 692 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ACSL5Q9ULC5 683 aa6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
IGHV4-55-201ENST00000520889 ASCC3Q8N3C0 2202 aaKnown RBP6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 CDX4O14627 284 aaPredicted RBP6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 FLRT2O43155 660 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 GPR39O43194 453 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 AQP9O43315 295 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 VPS26AO75436 327 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 GPC4O75487 556 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 FAM155BO75949 473 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 SLCO2B1O94956 709 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 AHSGP02765 367 aa6.26□□□□□ -1.41
IGHV4-55-201ENST00000520889 FUCA1P04066 466 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms