RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 TLK1Q9UKI8 766 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 SARDHQ9UL12 918 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 RAB23Q9ULC3 237 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 TRAPPC4Q9Y296 219 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 BTBD3Q9Y2F9 522 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 NAALAD2Q9Y3Q0 740 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 FKBP7Q9Y680 259 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
SHPRH-208ENST00000520752 TOGARAM1Q9Y4F4 1720 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 KRT87PA6NCN2 255 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PP2D1A8MPX8 630 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SLCO1B7G3V0H7 640 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 STX16-NPEPL1H3BU86 382 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TSPAN4O14817 238 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SYNCRIPO60506 623 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 RHOBTB1O94844 696 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SORBS2O94875 1100 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GH2P01242 217 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 C1QBP02746 253 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PRKCBP05771 671 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ITGAVP06756 1048 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TMEM191BP0C7N4 346 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CD8BP10966 210 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CD53P19397 219 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 KELP23276 732 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PTPN7P35236 360 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GABRB2P47870 512 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SLC1A6P48664 564 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PCBP3P57721 371 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ADARB1P78563 741 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CAP1Q01518 475 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CSTF3Q12996 717 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SLC13A2Q13183 592 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GPR50Q13585 617 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ZNF273Q14593 569 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 UBE2SQ16763 222 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 KIZQ2M2Z5 673 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GPAT3Q53EU6 434 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 MTX3Q5HYI7 312 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 HYIQ5T013 277 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SULT1C3Q6IMI6 304 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 EPGNQ6UW88 154 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 NAPRTQ6XQN6 538 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 HACD2Q6Y1H2 254 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GPRIN3Q6ZVF9 776 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 HTR3DQ70Z44 454 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 KATNAL2Q8IYT4 538 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 UBE2J2Q8N2K1 259 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TMEM35BQ8NCS4 154 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 BPIFB6Q8NFQ5 453 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SVIPQ8NHG7 77 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 PSMA8Q8TAA3 256 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 UTP15Q8TED0 518 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SETD7Q8WTS6 366 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 LRTOMTQ8WZ04 291 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SLC7A6Q92536 515 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 NXNL1Q96CM4 212 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 FAM89AQ96GI7 184 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SERAC1Q96JX3 654 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 UBXN10Q96LJ8 280 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ZNF416Q9BWM5 594 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 MUC13Q9H3R2 512 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SLC35C2Q9NQQ7 365 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SNX15Q9NRS6 342 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 SMPD3Q9NY59 655 aaPredicted RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TAS2R9Q9NYW1 312 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 CNOT6Q9ULM6 557 aaKnown RBP8.55□□□□□ -1.04
SHPRH-208ENST00000520752 USP22Q9UPT9 525 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 ZNF281Q9Y2X9 895 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 GMPPBQ9Y5P6 360 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
SHPRH-208ENST00000520752 AFDNP55196 1824 aaKnown RBP8.54□□□□□ -1.04
SHPRH-208ENST00000520752 DIP2CQ9Y2E4 1556 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 COL1A1P02452 1464 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-208ENST00000520752 HEATR9A2RTY3 570 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 ZNF99A8MXY4 864 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-208ENST00000520752 H0Y8X5 98 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 MEIS1O00470 390 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 HYAL3O43820 417 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-208ENST00000520752 MED24O75448 989 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 PRDM1O75626 825 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 SLC22A5O76082 557 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 SUPT7LO94864 414 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 CHRNA1P02708 482 aa8.54□□□□□ -1.04
SHPRH-208ENST00000520752 ENO3P13929 434 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-208ENST00000520752 CKMT2P17540 419 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms