RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SYTL1Q8IYJ3 562 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 PYCR2Q96C36 320 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 HAUS8Q9BT25 410 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 DERL2Q9GZP9 239 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 PCDHGB4Q9UN71 923 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 DNAJC15Q9Y5T4 150 aa10.05□□□□□ -0.8
MCF2-209ENST00000520602 DHRS12A0PJE2 317 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 EVPLLA8MZ36 301 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 FFAR2O15552 330 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 XYLBO75191 536 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 WDR47O94967 919 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 GSRP00390 522 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 CYP2A7P20853 494 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 RPIAP49247 311 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 POLR2JP52435 117 aaKnown RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 MAPKAPK3Q16644 382 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 DCAF4L2Q8NA75 395 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 FBXO30Q8TB52 745 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 SEZ6LQ9BYH1 1024 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 YY1AP1Q9H869 796 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 THEGQ9P2T0 379 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 ADAMTS6Q9UKP5 1117 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 OTOFQ9HC10 1997 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 GRM6O15303 877 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 SERPIND1P05546 499 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 CHN2P52757 468 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 HMGCS1Q01581 520 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 TGFBIQ15582 683 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 FAM91A1Q658Y4 838 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 TRMT11Q7Z4G4 463 aaKnown RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 OR2AP1Q8NGE2 309 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 MTIF3Q9H2K0 278 aaKnown RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 RUBCNLQ9H714 662 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 ZNF490Q9ULM2 529 aaPredicted RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 STK16O75716 305 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 MMP2P08253 660 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 MAGEA12P43365 314 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 FOXA1P55317 472 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 ZNF549Q6P9A3 640 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 SNX20Q7Z614 316 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 TRAPPC5Q8IUR0 188 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 YAF2Q8IY57 180 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 CYB5D2Q8WUJ1 264 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 FAM120BQ96EK7 910 aaKnown RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 PRICKLE1Q96MT3 831 aaPredicted RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 HOPXQ9BPY8 73 aaPredicted RBP10.04□□□□□ -0.8
MCF2-209ENST00000520602 SPASTQ9UBP0 616 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 SLCO3A1Q9UIG8 710 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 ZNF510Q9Y2H8 683 aa10.04□□□□□ -0.8
MCF2-209ENST00000520602 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GNG14A0A1W2PPG7 69 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 MROH6A6NGR9 719 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SLC22A2O15244 555 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LDLRP01130 860 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 FGBP02675 491 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ALBP02768 609 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CYP2A6P11509 494 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 CPOXP36551 454 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LMAN2Q12907 356 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 HERC3Q15034 1050 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GSTA3Q16772 222 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 PLEKHG6Q3KR16 790 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SETMARQ53H47 684 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GCNT7Q6ZNI0 430 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 ADCK2Q7Z695 626 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 MAGEE2Q8TD90 523 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 OVCA2Q8WZ82 227 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 WBP2Q969T9 261 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 PPP3R2Q96LZ3 170 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 NR1H4Q96RI1 486 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 BOCQ9BWV1 1114 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GSTO2Q9H4Y5 243 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SUV39H2Q9H5I1 410 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 GEMIN8Q9NWZ8 242 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 WARS2Q9UGM6 360 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 PNMA8BQ9ULN7 279 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 LOC285556D6RIA3 1793 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 POP4O95707 220 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 ZNF682O95780 498 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CKMT2P17540 419 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 S100A3P33764 101 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 HNF1BP35680 557 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CCNHP51946 323 aaPredicted RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 UFM1P61960 85 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 CREMQ03060 361 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 FNDC3BQ53EP0 1204 aaKnown RBP10.03□□□□□ -0.8
MCF2-209ENST00000520602 ERAP2Q6P179 960 aa10.03□□□□□ -0.8
MCF2-209ENST00000520602 SPATA19Q7Z5L4 167 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms