RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 HOXB6P17509 224 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 LBPP18428 481 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CDH2P19022 906 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 HLA-DPA1P20036 260 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TCN1P20061 433 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 MYF6P23409 242 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GABRB3P28472 473 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GMPRP36959 345 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 VIPR2P41587 438 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 DPP6P42658 865 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 MRPL19P49406 292 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CDKL1Q00532 357 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TWF1Q12792 350 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SRSF5Q13243 272 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF460Q14592 562 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 UPP1Q16831 310 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CTXN3Q4LDR2 81 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 MTX3Q5HYI7 312 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 FAM78AQ5JUQ0 283 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF678Q5SXM1 525 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 FAM182AQ5T1J6 154 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 AFMIDQ63HM1 303 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 DENND5AQ6IQ26 1287 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 C8orf82Q6P1X6 216 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TTC33Q6PID6 262 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 DHRS4L2Q6PKH6 230 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 KDELC1Q6UW63 502 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 RANBP10Q6VN20 620 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GPRIN1Q7Z2K8 1008 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 AMIGO2Q86SJ2 522 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SPATA2LQ8IUW3 424 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ARHGAP12Q8IWW6 846 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ELMOD1Q8N336 334 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 MINDY1Q8N5J2 469 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 METTL25Q8N6Q8 603 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ACVR1CQ8NER5 493 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZMIZ2Q8NF64 920 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SPATA22Q8NHS9 363 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZFP28Q8NHY6 868 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 RHEBL1Q8TAI7 183 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 LRTOMTQ8WZ04 291 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 FAM3CQ92520 227 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 POP5Q969H6 163 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SGF29Q96ES7 293 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 IMP4Q96G21 291 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 UBXN10Q96LJ8 280 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZSWIM3Q96MP5 696 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TRMT61BQ9BVS5 477 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CCDC68Q9H2F9 335 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GSTO2Q9H4Y5 243 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CAAP1Q9H8G2 361 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 LMAN1LQ9HAT1 526 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PLGRKTQ9HBL7 147 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SYTL2Q9HCH5 934 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ZFP14Q9HCL3 533 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CYP4F12Q9HCS2 524 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PARD6AQ9NPB6 346 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CCM2LQ9NUG4 571 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 GDE1Q9NZC3 331 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM9Q9P0T7 183 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ACTR3BQ9P1U1 418 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 ABCD2Q9UBJ2 740 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CD300AQ9UGN4 299 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 SUN2Q9UH99 717 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PACSIN3Q9UKS6 424 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 CEPT1Q9Y6K0 416 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 PIAS3Q9Y6X2 628 aa8.56□□□□□ -1.04
CTNNA1-223ENST00000520520 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 MYBPHLA2RUH7 354 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF839A8K0R7 811 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM233B4DJY2 109 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 E9PAM4 449 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 STX16-NPEPL1H3BU86 382 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 AZIN1O14977 448 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 GMNNO75496 209 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 MT-CYBP00156 380 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 NPPAP01160 153 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 JUNP05412 331 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 FGF4P08620 206 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 FCARP24071 287 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 ARNTP27540 789 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 HMOX2P30519 316 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 CCR2P41597 374 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 CCR10P46092 362 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 SOX9P48436 509 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 KCNK10P57789 538 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 TNK2Q07912 1038 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 NRF1Q16656 503 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 ZBED5Q49AG3 693 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 C6orf10Q5SRN2 563 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 MARC1Q5VT66 337 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 TXNDC11Q6PKC3 985 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 ABRAXAS1Q6UWZ7 409 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 CD300LGQ6UXG3 332 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 VITQ6UXI7 678 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 LARP4Q71RC2 724 aaKnown RBP eCLIP8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 BHLHA9Q7RTU4 235 aa8.55□□□□□ -1.04
CTNNA1-223ENST00000520520 CILP2Q8IUL8 1156 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms