RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 LRIF1Q5T3J3 769 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 RBPMS2Q6ZRY4 209 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 MON1BQ7L1V2 547 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 RBM23Q86U06 439 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 NR2C2APQ86WQ0 139 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 MB21D2Q8IYB1 491 aaPredicted RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 CCDC13Q8IYE1 715 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SCYL3Q8IZE3 742 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SPATA6LQ8N4H0 392 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 TMCO5AQ8N6Q1 288 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 XXYLT1Q8NBI6 393 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 OR8H1Q8NGG4 311 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 OR8K5Q8NH50 307 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 KIF18AQ8NI77 898 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SETD6Q8TBK2 473 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FAM216AQ8WUB2 273 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 RTP4Q96DX8 246 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FER1L6-AS2Q96M78 137 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FNBP1Q96RU3 617 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 PAFAH2Q99487 392 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SYT17Q9BSW7 474 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SLC25A23Q9BV35 468 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 THUMPD3Q9BV44 507 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 ANKRD2Q9GZV1 360 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 ESRP2Q9H6T0 727 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 COPS7BQ9H9Q2 264 aaPredicted RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 EPB41L5Q9HCM4 733 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 GPR108Q9NPR9 543 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 MBNL1Q9NR56 388 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 TRMT1Q9NXH9 659 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 CISD1Q9NZ45 108 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 ICAM5Q9UMF0 924 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 R3HDM2Q9Y2K5 976 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 CLIC4Q9Y696 253 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 URADA6NGE7 173 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 ITM2AO43736 263 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 STX6O43752 255 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SYNCRIPO60506 623 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 KCNJ13O60928 360 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SOX30O94993 753 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 GH2P01242 217 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 MMP9P14780 707 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 HNF4AP41235 474 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 AMTP48728 403 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 CCR3P51677 355 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SIRPAP78324 504 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 EFHC1Q5JVL4 640 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 C9orf50Q5SZB4 431 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 ANKRD54Q6NXT1 300 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 CLEC17AQ6ZS10 378 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 ERN2Q76MJ5 926 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 MAML2Q8IZL2 1156 aaPredicted RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 MIGA1Q8NAN2 632 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 OR10S1Q8NGN2 331 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SECISBP2LQ93073 1101 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 EGLN2Q96KS0 407 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 CCDC43Q96MW1 224 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 NAA11Q9BSU3 229 aaPredicted RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 RTN4RQ9BZR6 473 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SLC28A3Q9HAS3 691 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 PIH1D3Q9NQM4 214 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 PAG1Q9NWQ8 432 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 CRNNQ9UBG3 495 aaPredicted RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 OR14J1Q9UGF5 321 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 ZNF148Q9UQR1 794 aa4.03□□□□□ -1.76
SQLE-204ENST00000520493 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.03□□□□□ -1.76
SQLE-204ENST00000520493 C1orf226A1L170 272 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CLEC18AA5D8T8 446 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CCDC188H7C350 402 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 ATP2A1O14983 1001 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 LDB2O43679 373 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 FMO6PO60774 539 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 SERPINI2O75830 405 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 C22orf31O95567 290 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 FDPSP14324 419 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 PRLRP16471 622 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 ERCC2P18074 760 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 TLX1P31314 330 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 ATP6V1E1P36543 226 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 SUOXP51687 545 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CSE1LP55060 971 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 ECT2LQ008S8 904 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 UBXN1Q04323 297 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 GRSF1Q12849 480 aaKnown RBP eCLIP4.02□□□□□ -1.77
SQLE-204ENST00000520493 CAMK2DQ13557 499 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 SMC1AQ14683 1233 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 SLMAPQ14BN4 828 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 HYAL4Q2M3T9 481 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 ZNF284Q2VY69 593 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 MMEL1Q495T6 779 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 TTC31Q49AM3 519 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 CBWD6Q4V339 395 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CBWD3Q5JTY5 395 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 FRG2Q64ET8 278 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms