RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 BPIP17213 487 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 RPS3P23396 243 aaKnown RBP eCLIP25.42■■□□□ 1.66
COL13A1-213ENST00000520267 CTSOP43234 321 aaPredicted RBP25.42■■□□□ 1.66
COL13A1-213ENST00000520267 ERVPABLB-1P60509 514 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 RHDQ02161 417 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 FRA10AC1Q70Z53 315 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 EFL1Q7Z2Z2 1120 aaKnown RBP25.42■■□□□ 1.66
COL13A1-213ENST00000520267 FIBCD1Q8N539 461 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 CLDN19Q8N6F1 224 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 CDYL2Q8N8U2 506 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 YME1L1Q96TA2 773 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 CRISPLD2Q9H0B8 497 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 GIPC1O14908 333 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 SOCS5O75159 536 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 LRG1P02750 347 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 MPP7Q5T2T1 576 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 RNF220Q5VTB9 566 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 BLOC1S3Q6QNY0 202 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 RBFAQ8N0V3 343 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 ADCY4Q8NFM4 1077 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 TEX37Q96LM6 180 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 ZNF382Q96SR6 550 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 ATP13A3Q9H7F0 1226 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 AIG1Q9NVV5 245 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 ZNF510Q9Y2H8 683 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 AP4S1Q9Y587 144 aa25.42■■□□□ 1.66
COL13A1-213ENST00000520267 NME4O00746 187 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 FGF18O76093 207 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 IGSF6O95976 241 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 CAPNS1P04632 268 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 ACRP10323 421 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 STK19P49842 368 aaPredicted RBP25.41■■□□□ 1.66
COL13A1-213ENST00000520267 YBX1P67809 324 aaKnown RBP25.41■■□□□ 1.66
COL13A1-213ENST00000520267 SEMG2Q02383 582 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 VOPP1Q96AW1 172 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 SLCO4A1Q96BD0 722 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 NOL11Q9H8H0 719 aaKnown RBP25.41■■□□□ 1.66
COL13A1-213ENST00000520267 GNPTGQ9UJJ9 305 aa25.41■■□□□ 1.66
COL13A1-213ENST00000520267 PTPRSQ13332 1948 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 LEFTY2O00292 366 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 ITGALP20701 1170 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 MAPK8P45983 427 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 CAPRIN1Q14444 709 aaKnown RBP25.4■■□□□ 1.66
COL13A1-213ENST00000520267 LETMD1Q6P1Q0 360 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 TSPAN33Q86UF1 283 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 HOPXQ9BPY8 73 aaPredicted RBP25.4■■□□□ 1.66
COL13A1-213ENST00000520267 PDP2Q9P2J9 529 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 APPL1Q9UKG1 709 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 DOCK6Q96HP0 2047 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 TRAV19A0A0A6YYK7 116 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 TRBV5-4A0A0C4DH59 114 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 TCRBV3S1A0A5B6 114 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 GOLGA8CPA6NN73 597 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 FXYD1O00168 92 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 PPM1AP35813 382 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 ZFP36L2P47974 494 aaKnown RBP25.4■■□□□ 1.66
COL13A1-213ENST00000520267 PDK3Q15120 406 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 PCBP2Q15366 365 aaKnown RBP eCLIP25.4■■□□□ 1.66
COL13A1-213ENST00000520267 CHRNA6Q15825 494 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 ADAMTSL2Q86TH1 951 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 APLFQ8IW19 511 aaPredicted RBP25.4■■□□□ 1.66
COL13A1-213ENST00000520267 CATSPER1Q8NEC5 780 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 SLC46A2Q9BY10 475 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 ABCD2Q9UBJ2 740 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 MYOFQ9NZM1 2061 aa25.4■■□□□ 1.66
COL13A1-213ENST00000520267 GLYATL1P3A0A0U1RQE8 302 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 SLC25A14O95258 325 aaPredicted RBP25.39■■□□□ 1.66
COL13A1-213ENST00000520267 TRIM16O95361 564 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 CTSAP10619 480 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 ACRV1P26436 265 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 TLR1Q15399 786 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 MAP7D1Q3KQU3 841 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 GOLGA7Q7Z5G4 137 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 CMTM8Q8IZV2 173 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 MINDY1Q8N5J2 469 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 OR2AP1Q8NGE2 309 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 C1orf50Q9BV19 199 aa25.39■■□□□ 1.66
COL13A1-213ENST00000520267 MKI67P46013 3256 aaKnown RBP25.39■■□□□ 1.65
COL13A1-213ENST00000520267 C8AP07357 584 aa25.39■■□□□ 1.65
COL13A1-213ENST00000520267 SRCP12931 536 aa25.39■■□□□ 1.65
COL13A1-213ENST00000520267 LILRA6Q6PI73 481 aa25.39■■□□□ 1.65
COL13A1-213ENST00000520267 SLC15A3Q8IY34 581 aa25.39■■□□□ 1.65
COL13A1-213ENST00000520267 CRLS1Q9UJA2 301 aa25.39■■□□□ 1.65
COL13A1-213ENST00000520267 NPIPB15A6NHN6 443 aaPredicted RBP25.38■■□□□ 1.65
COL13A1-213ENST00000520267 OR7A17O14581 309 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 FFAR2O15552 330 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 UFM1P61960 85 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 CREMQ03060 361 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 DHFR2Q86XF0 187 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 RIN3Q8TB24 985 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 LRTOMTQ8WZ04 291 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 VPS33AQ96AX1 596 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 LRRC58Q96CX6 371 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 LMLNQ96KR4 655 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 YIPF3Q9GZM5 350 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 TLR9Q9NR96 1032 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 SPATS2LQ9NUQ6 558 aaKnown RBP25.38■■□□□ 1.65
COL13A1-213ENST00000520267 SUFUQ9UMX1 484 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 ST14Q9Y5Y6 855 aa25.38■■□□□ 1.65
COL13A1-213ENST00000520267 ASPDHA6ND91 283 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms