RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FBLP22087 321 aaKnown RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 TACR3P29371 465 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 OR1D2P34982 312 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 UBE2HP62256 183 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 RBP5P82980 135 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 CTXN3Q4LDR2 81 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 RARS2Q5T160 578 aaKnown RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 TMEM88Q6PEY1 159 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF474Q6S9Z5 364 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 SYT13Q7L8C5 426 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 GUF1Q8N442 669 aaKnown RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 CSGALNACT2Q8N6G5 542 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 OSR1Q8TAX0 266 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-208ENST00000520228 HDAC7Q8WUI4 952 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 IGFBPL1Q8WX77 278 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 SUSD6Q92537 303 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 SMARCE1Q969G3 411 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 CCDC127Q96BQ5 260 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 SENP8Q96LD8 212 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 FNBP1Q96RU3 617 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 PLEKHA4Q9H4M7 779 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 SFXN1Q9H9B4 322 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 TMLHEQ9NVH6 421 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 DMAC2Q9NW81 257 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 BDP1A6H8Y1 2624 aa7.2□□□□□ -1.26
SDCBP-208ENST00000520228 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-208ENST00000520228 MYO7AQ13402 2215 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ARHGEF37A1IGU5 675 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 KPNA7A9QM74 516 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 MASP2O00187 686 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 CYB561D2O14569 222 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 CNTN5O94779 1100 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 OAZ2O95190 189 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TNNC2P02585 160 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 NR3C1P04150 777 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 KRT19P08727 400 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TMEM191BP0C7N4 346 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 DLATP10515 647 aaKnown RBP7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ODC1P11926 461 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TNNI1P19237 187 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TYMPP19971 482 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 CERS1P27544 350 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 PNPLA4P41247 253 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 MTHFRP42898 656 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 CCT5P48643 541 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TAF6P49848 677 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ARPP19P56211 112 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 SHC2P98077 582 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 YWHAHQ04917 246 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-208ENST00000520228 CYP24A1Q07973 514 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 MYBPC2Q14324 1141 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 PSMD6Q15008 389 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 LIN9Q5TKA1 542 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 SLC8B1Q6J4K2 584 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 KIAA1324Q6UXG2 1013 aaKnown RBP7.19□□□□□ -1.26
SDCBP-208ENST00000520228 WDR49Q8IV35 697 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ADHFE1Q8IWW8 467 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 LRRC52Q8N7C0 313 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ADPRHL1Q8NDY3 354 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 OR5B17Q8NGF7 314 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 SPATA20Q8TB22 786 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TMEM174Q8WUU8 243 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ANKRD36BP1Q96IX9 119 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF560Q96MR9 790 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 NECTIN4Q96NY8 510 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 PHF7Q9BWX1 381 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-208ENST00000520228 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 PRDM16Q9HAZ2 1276 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 FBXL5Q9UKA1 691 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 ITGA11Q9UKX5 1188 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 TRAF3IP3Q9Y228 551 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 FRMD4BQ9Y2L6 1034 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
SDCBP-208ENST00000520228 SPTBN5Q9NRC6 3674 aaKnown RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 VCANP13611 3396 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 REV3LO60673 3130 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PPP6CO00743 305 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 HNRNPRO43390 633 aaKnown RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RFPL2O75678 378 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 KRT38O76015 456 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RNF8O76064 485 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PLAUP00749 431 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 WEE2P0C1S8 567 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 CD38P28907 300 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ELF1P32519 619 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PRCPP42785 496 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 YPEL5P62699 121 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ROR1Q01973 937 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 BFSP1Q12934 665 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RAPGEF1Q13905 1077 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 PPM1LQ5SGD2 360 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ZNF658Q5TYW1 1059 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-208ENST00000520228 ISM2Q6H9L7 571 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 CYP26C1Q6V0L0 522 aa7.18□□□□□ -1.26
SDCBP-208ENST00000520228 RBM44Q6ZP01 1051 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms