RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MTG1Q9BT17 334 aaPredicted RBP16.39■□□□□ 0.21
PCDHGA11-202ENST00000518882 FANCEQ9HB96 536 aa16.39■□□□□ 0.21
PCDHGA11-202ENST00000518882 LTB4R2Q9NPC1 389 aa16.39■□□□□ 0.21
PCDHGA11-202ENST00000518882 ZIM2Q9NZV7 527 aa16.39■□□□□ 0.21
PCDHGA11-202ENST00000518882 SUN2Q9UH99 717 aa16.39■□□□□ 0.21
PCDHGA11-202ENST00000518882 H0YAE9 185 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NIPSNAP2O75323 286 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NDST3O95803 873 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CHEK2O96017 543 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 SERPINF2P08697 491 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CDH1P12830 882 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 EEF1B2P24534 225 aaKnown RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ERVPABLB-1P60509 514 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 GRSF1Q12849 480 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ILF2Q12905 390 aaKnown RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NFATC3Q12968 1075 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NADSYN1Q6IA69 706 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ZNF773Q6PK81 442 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 RBM12BQ8IXT5 1001 aaKnown RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PIANPQ8IYJ0 282 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CFAP52Q8N1V2 620 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 EEF1AKMT1Q8WVE0 214 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 BORCS5Q969J3 196 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 TMBIM1Q969X1 311 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NSMCE2Q96MF7 247 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 YTHDF1Q9BYJ9 559 aaKnown RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CCDC68Q9H2F9 335 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ACTL8Q9H568 366 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NEUROG3Q9Y4Z2 214 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 VWA8A3KMH1 1905 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 NDUFS3O75489 264 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 MLYCDO95822 493 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ALPLP05186 524 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 THPOP40225 353 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 HTR6P50406 440 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PSMD7P51665 324 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PLIN5Q00G26 463 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 DSC3Q14574 896 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 TRIP4Q15650 581 aaPredicted RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CRY1Q16526 586 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 XAF1Q6GPH4 301 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PSAPL1Q6NUJ1 521 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 GPRIN3Q6ZVF9 776 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 TRIM74Q86UV6 250 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 TRIM73Q86UV7 250 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 ZNF280BQ86YH2 543 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 SFRP1Q8N474 314 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 FAM86B1Q8N7N1 296 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PLEKHA8Q96JA3 519 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 EXOC2Q96KP1 924 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 B3GALT6Q96L58 329 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 CARS2Q9HA77 564 aaKnown RBP16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 TBC1D23Q9NUY8 699 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 RIMKLBQ9ULI2 386 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 PCDHB3Q9Y5E6 796 aa16.38■□□□□ 0.21
PCDHGA11-202ENST00000518882 RSL1D1O76021 490 aaKnown RBP16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 MBL2P11226 248 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 TRAF2Q12933 501 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 PRKG2Q13237 762 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 BTG3Q14201 252 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 LETMD1Q6P1Q0 360 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 GLT6D1Q7Z4J2 308 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 TERB1Q8NA31 727 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 SNX19Q92543 992 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 UROC1Q96N76 676 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 TUBA1CQ9BQE3 449 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 FBXO44Q9H4M3 255 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 MARCH2Q9P0N8 246 aa16.37■□□□□ 0.21
PCDHGA11-202ENST00000518882 SLC12A8A0AV02 714 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 PRSS23O95084 383 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 ALDH3A2P51648 485 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 BMXP51813 675 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 DGKQP52824 942 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 PTPRRQ15256 657 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 C18orf21Q32NC0 220 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 ATP6AP1LQ52LC2 224 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 CTSL3PQ5NE16 218 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 TXNDC11Q6PKC3 985 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 AFTPHQ6ULP2 937 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 DPP10Q8N608 796 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 OR56A4Q8NGH8 313 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 RMDN1Q96DB5 314 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 CD274Q9NZQ7 290 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 ZNF711Q9Y462 761 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 A0A0U1RQS6 177 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 J3QRK9 145 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 SEC14L2O76054 403 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 G6PDP11413 515 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 HOXD9P28356 352 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 IST1P53990 364 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 C21orf59P57076 290 aa16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 YBEYP58557 167 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA11-202ENST00000518882 DAG1Q14118 895 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms