RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZFAND4Q86XD8 727 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 CATSPERDQ86XM0 798 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 FMNL3Q8IVF7 1028 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 UBR7Q8N806 425 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 ENDOVQ8N8Q3 282 aaKnown RBP-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 ACVR1CQ8NER5 493 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 ZMIZ2Q8NF64 920 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 KBTBD8Q8NFY9 601 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 OR2T12Q8NG77 320 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 SMAP2Q8WU79 429 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 DYRK2Q92630 601 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 KATNAL1Q9BW62 490 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 ESRP2Q9H6T0 727 aaKnown RBP-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 ATP6V0A4Q9HBG4 840 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 NLKQ9UBE8 527 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 PADI3Q9ULW8 664 aa-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 R3HDM2Q9Y2K5 976 aaKnown RBP-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 SEC23IPQ9Y6Y8 1000 aaKnown RBP-1.09□□□□□ -2.58
RNU6-539P-201ENST00000516665 USP19O94966 1318 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SHROOM3Q8TF72 1996 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 IGLV4-3A0A075B6K6 122 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 IGHV4-30-2A0A087WSY4 118 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 CCDC194A0A1B0GVG4 234 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 DLGAP1O14490 977 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ANPEPP15144 967 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 BDKRB2P30411 391 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC12A3P55017 1021 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 LGALS3BPQ08380 585 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 PLA2G7Q13093 441 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 TDGQ13569 410 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATP1A4Q13733 1029 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 UBE4AQ14139 1066 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 GPNMBQ14956 572 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 TAF9Q16594 264 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ESCO2Q56NI9 601 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SPIN3Q5JUX0 258 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 FAM182AQ5T1J6 154 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 PRR9Q5T870 116 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 PGBD2Q6P3X8 592 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 MTSS1LQ765P7 747 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ABHD12BQ7Z5M8 362 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 NOXA1Q86UR1 476 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 MIER2Q8N344 545 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 GALNT15Q8N3T1 639 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 PARP16Q8N5Y8 322 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 GTSF1Q8WW33 167 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC44A1Q8WWI5 657 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 NMD3Q96D46 503 aaKnown RBP-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 C18orf8Q96DM3 657 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 PELI1Q96FA3 418 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF486Q96H40 463 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZNF641Q96N77 438 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 QRFPRQ96P65 431 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 RANBP9Q96S59 729 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 LGMNQ99538 433 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATF6BQ99941 703 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 NUDT22Q9BRQ3 303 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 UBAC1Q9BSL1 405 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 CCDC28BQ9BUN5 200 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 CADM1Q9BY67 442 aaKnown RBP-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 VCXQ9H320 206 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 JPT2Q9H910 190 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 MED20Q9H944 212 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZBTB26Q9HCK0 441 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC22A11Q9NSA0 550 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 BABAM1Q9NWV8 329 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 COQ3Q9NZJ6 369 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC25A13Q9UJS0 675 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 NFE2L3Q9Y4A8 694 aa-1.1□□□□□ -2.59
RNU6-539P-201ENST00000516665 LOC105371242A0A075B767 164 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 MTMR11A4FU01 709 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 OR2W5A6NFC9 320 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 TRIM49D1C9J1S8 452 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 ATP2C2O75185 946 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 TAF5LO75529 589 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 POU2F2P09086 479 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 MYCLP1P12525 358 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 SRD5A1P18405 259 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 AKAP5P24588 427 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 GSTM2P28161 218 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 SLC7A1P30825 629 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 SUMO3P55854 103 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 TRA2AQ13595 282 aaKnown RBP eCLIP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 LTB4RQ15722 352 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 KRT24Q2M2I5 525 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 AGAP7PQ5VUJ5 663 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 LEMD1Q68G75 181 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 BRAT1Q6PJG6 821 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 CRTC1Q6UUV9 634 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 PIGZQ86VD9 579 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 C2CD5Q86YS7 1000 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 CROCCP3Q8IVE0 287 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 BRSK2Q8IWQ3 736 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 GLIS1Q8NBF1 620 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 OXNAD1Q96HP4 312 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 IMMP1LQ96LU5 166 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 STRA6Q9BX79 667 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 GPN1Q9HCN4 374 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 ZDHHC4Q9NPG8 344 aa-1.11□□□□□ -2.59
RNU6-539P-201ENST00000516665 TCP11L1Q9NUJ3 509 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms