RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	PLEKHS1	Q5SXH7	462 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	HENMT1	Q5T8I9	393 aa	Known RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	PRAMEF17	Q5VTA0	474 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	DCUN1D2	Q6PH85	259 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	FAM198B	Q6UWH4	519 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	KCNMB4	Q86W47	210 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	PHF13	Q86YI8	300 aa	Predicted RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	RBM12B	Q8IXT5	1001 aa	Known RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	DSEL	Q8IZU8	1212 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZADH2	Q8N4Q0	377 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	PEBP4	Q96S96	227 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	EIF3C	Q99613	913 aa	Known RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TUBB2B	Q9BVA1	445 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	NT5M	Q9NPB1	228 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	SEPT11	Q9NVA2	429 aa	Known RBP	10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TMEM63C	Q9P1W3	806 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	TRIM10	Q9UDY6	481 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	PCSK1N	Q9UHG2	260 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	DNPEP	Q9ULA0	475 aa		10.28	□□□□□ -0.76
CLDND1-231	ENST00000515620	C1orf232	A0A0U1RR37	186 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	UBA6	A0AVT1	1052 aa	Predicted RBP	10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	TLCD2	A6NGC4	264 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	DDX3Y	O15523	660 aa	Known RBP	10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	FZD6	O60353	706 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	MAFK	O60675	156 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF7	P17097	686 aa	Predicted RBP	10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	IL4R	P24394	825 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	PTGER4	P35408	488 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	SPINT3	P49223	89 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	HSD11B2	P80365	405 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ITK	Q08881	620 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	DPYS	Q14117	519 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	MYBPC3	Q14896	1274 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ANO6	Q4KMQ2	910 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF569	Q5MCW4	686 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	PPP1R15B	Q5SWA1	713 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ERMARD	Q5T6L9	678 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	MARC1	Q5VT66	337 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	IGFL3	Q6UXB1	125 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	MRGPRE	Q86SM8	312 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	KMT5C	Q86Y97	462 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	RAB43	Q86YS6	212 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	D2HGDH	Q8N465	521 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ATPAF2	Q8N5M1	289 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	CLEC1A	Q8NC01	280 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	LPCAT1	Q8NF37	534 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	OR8K5	Q8NH50	307 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	NSMCE1	Q8WV22	266 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	CPT1B	Q92523	772 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	TM9SF4	Q92544	642 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF501	Q96CX3	271 aa	Predicted RBP	10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	CLIP3	Q96DZ5	547 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	TUBGCP2	Q9BSJ2	902 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	FAM83D	Q9H4H8	585 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	KCND1	Q9NSA2	647 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	SOHLH2	Q9NX45	425 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	DTL	Q9NZJ0	730 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	CWC15	Q9P013	229 aa	Known RBP	10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	CHKB	Q9Y259	395 aa		10.27	□□□□□ -0.77
CLDND1-231	ENST00000515620	MED13L	Q71F56	2210 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	CHUK	O15111	745 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	KMO	O15229	486 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	SLC25A14	O95258	325 aa	Predicted RBP	10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	CAPN1	P07384	714 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	PSMA2	P25787	234 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	SOX5	P35711	763 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ABR	Q12979	859 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	NCF4	Q15080	339 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	PLCL1	Q15111	1095 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	PTCHD3	Q3KNS1	767 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ALS2CL	Q60I27	953 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	KLHL35	Q6PF15	583 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	TMCO3	Q6UWJ1	677 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ABRAXAS1	Q6UWZ7	409 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620		Q6ZS92	163 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ADGRG6	Q86SQ4	1221 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	LRRTM4	Q86VH4	590 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	SYTL1	Q8IYJ3	562 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	NXPE1	Q8N323	547 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	GALNT16	Q8N428	558 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	GPR150	Q8NGU9	434 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	GRHL3	Q8TE85	626 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	LRFN5	Q96NI6	719 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	CD180	Q99467	661 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	TIMM29	Q9BSF4	260 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	SPATA16	Q9BXB7	569 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	TLR10	Q9BXR5	811 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	GAN	Q9H2C0	597 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZNF552	Q9H707	407 aa	Predicted RBP	10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ZBTB20	Q9HC78	741 aa	Predicted RBP	10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	TRIM39	Q9HCM9	518 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	NLRC4	Q9NPP4	1024 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	ETNK2	Q9NVF9	386 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	PKD2L2	Q9NZM6	624 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	NOVA2	Q9UNW9	492 aa	Known RBP	10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	TTLL3	Q9Y4R7	772 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	CSAG2	Q9Y5P2	127 aa		10.26	□□□□□ -0.77
CLDND1-231	ENST00000515620	PCNX1	Q96RV3	2341 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms