RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ZPBPQ9BS86 351 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 C10orf88Q9H8K7 445 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 POT1Q9NUX5 634 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 TRIM10Q9UDY6 481 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
TCOF1-215ENST00000515516 PJA2O43164 708 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A9O60656 530 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 C1QL1O75973 258 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 TYRP1P17643 537 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A6P19224 532 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 MSH3P20585 1137 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 LPOP22079 712 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A1P22309 533 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A4P22310 534 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 FECHP22830 423 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 AKT1P31749 480 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A3P35503 534 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 SLC19A1P41440 591 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 DRG2P55039 364 aaKnown RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 PDE1BQ01064 536 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 MC2RQ01718 297 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 KIF5AQ12840 1032 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 SRSF6Q13247 344 aaKnown RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 LY6DQ14210 128 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 TAF1AQ15573 450 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 LONRF2Q1L5Z9 754 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 KHDC1Q4VXA5 237 aaKnown RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ANKS6Q68DC2 871 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 XKR5Q6UX68 686 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 WASH2PQ6VEQ5 465 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 RAD9BQ6WBX8 426 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ARHGAP22Q7Z5H3 698 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ZNF547Q8IVP9 402 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 CACNA2D3Q8IZS8 1091 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ZNF398Q8TD17 642 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 MED8Q96G25 268 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A7Q9HAW7 530 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A10Q9HAW8 530 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 UGT1A8Q9HAW9 530 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 WASH6PQ9NQA3 447 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 SCHIP1Q9P0W5 487 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 ZNF624Q9P2J8 865 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
TCOF1-215ENST00000515516 DNMT3AQ9Y6K1 912 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-215ENST00000515516 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 GOLGA6L6A8MZA4 724 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 POLR1CO15160 346 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-215ENST00000515516 CRTAMO95727 393 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 ITGB2P05107 769 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 GPRC6AQ5T6X5 926 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 TMEM220Q6QAJ8 160 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 RASGEF1AQ8N9B8 481 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 TTC13Q8NBP0 860 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 DDHD1Q8NEL9 900 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 NKD1Q969G9 470 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 ZDHHC12Q96GR4 267 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 ZNF514Q96K75 400 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-215ENST00000515516 TGM7Q96PF1 710 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 FBXO8Q9NRD0 319 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 PTPRQQ9UMZ3 2332 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
TCOF1-215ENST00000515516 ARL5AQ9Y689 179 aa13.43□□□□□ -0.26
TCOF1-215ENST00000515516 GRID2IPA4D2P6 1211 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 OR2AG2A6NM03 316 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 OR52A4PA6NMU1 304 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 MIF4GDA9UHW6 222 aaKnown RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 CAPN5O15484 640 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 RAD1O60671 282 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 RASSF9O75901 435 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 PRAMEF1O95521 474 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 PYGMP11217 842 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 RALBP11234 206 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 MAP4P27816 1152 aaKnown RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 PSMB4P28070 264 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 PBLDP30039 288 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 FNBP1LQ5T0N5 605 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 KLHL35Q6PF15 583 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 RANBP10Q6VN20 620 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 ARHGEF18Q6ZSZ5 1173 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 NLGN4XQ8N0W4 816 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 BMPERQ8N8U9 685 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 NLGN4YQ8NFZ3 816 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 OR4K2Q8NGD2 314 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 CCDC110Q8TBZ0 833 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 PMEPA1Q969W9 287 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 KIAA1143Q96AT1 154 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-215ENST00000515516 RTP4Q96DX8 246 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 DCUN1D1Q96GG9 259 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 C9orf72Q96LT7 481 aa13.42□□□□□ -0.26
TCOF1-215ENST00000515516 SPATA13Q96N96 652 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms