RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FBXO6Q9NRD1 293 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-220ENST00000514830 TMEM74BQ9NUR3 256 aa11.82□□□□□ -0.52
PDLIM5-220ENST00000514830 TXNDC16Q9P2K2 825 aa11.82□□□□□ -0.52
PDLIM5-220ENST00000514830 GNPTGQ9UJJ9 305 aa11.82□□□□□ -0.52
PDLIM5-220ENST00000514830 CACNA1BQ00975 2339 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SDK1Q7Z5N4 2213 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PRSS38A1L453 326 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PRR19A6NJB7 356 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 OR1I1O60431 355 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 CDH16O75309 829 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 FAM155BO75949 473 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SHBGP04278 402 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 INHBAP08476 426 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 OR56A5P0C7T3 313 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PKMP14618 531 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF8P17098 575 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 CTSKP43235 329 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 MSH2P43246 934 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 BLKP51451 505 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 CLCNKAP51800 687 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 DNAJC3Q13217 504 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 LRP8Q14114 963 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PDE1CQ14123 709 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 EFTUD2Q15029 972 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■□□□□ 11.1
PDLIM5-220ENST00000514830 ZNF658BQ4V348 819 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PYCR3Q53H96 274 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 LGSNQ5TDP6 509 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF549Q6P9A3 640 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 CNSTQ6PJW8 725 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PRR23BQ6ZRT6 265 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 TAOK1Q7L7X3 1001 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 C11orf96Q7Z7L8 435 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 TRIM74Q86UV6 250 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PARGQ86W56 976 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SPATS2Q86XZ4 545 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 ZNF547Q8IVP9 402 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 KIAA2013Q8IYS2 634 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SUMF1Q8NBK3 374 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 ISL2Q96A47 359 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 VPS39Q96JC1 886 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 TIMM29Q9BSF4 260 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 AARSD1Q9BTE6 412 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 TSSK1BQ9BXA7 367 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 ZDHHC5Q9C0B5 715 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 OR2AG1Q9H205 316 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 POPDC3Q9HBV1 291 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 CAPN10Q9HC96 672 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 FGF22Q9HCT0 170 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 TRNAU1APQ9NX07 287 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SLC17A6Q9P2U8 582 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PSMC3IPQ9P2W1 217 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 SMG5Q9UPR3 1016 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 PLAAQ9Y263 795 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 IKBKGQ9Y6K9 419 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 R4GN57 208 aa11.81□□□□□ -0.52
PDLIM5-220ENST00000514830 KNL1Q8NG31 2342 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 KPNA5O15131 536 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 KMOO15229 486 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 DFNA5O60443 496 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 MTX2O75431 263 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 KRT38O76015 456 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 RASGRP1O95267 797 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 FTH1P02794 183 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 FUCA1P04066 466 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CSF2P04141 144 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 RETP07949 1114 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 ITGA2BP08514 1039 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 NME1P15531 152 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 SKIV2L2P42285 1042 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 RXRGP48443 463 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CSRP3P50461 194 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CTSCP53634 463 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 C21orf59P57076 290 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 SRP54P61011 504 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 POU4F1Q01851 419 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 DMPKQ09013 629 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 EIF2B5Q13144 721 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CASP8Q14790 479 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CTSL3PQ5NE16 218 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 FAM45BPQ6NSW5 357 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 ENPP7Q6UWV6 458 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 HDXQ7Z353 690 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CCDC91Q7Z6B0 441 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 LRRTM4Q86VH4 590 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 SDR16C5Q8N3Y7 309 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CLDN19Q8N6F1 224 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 UHMK1Q8TAS1 419 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 FAM45AQ8TCE6 357 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 PIGKQ92643 395 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 MTBPQ96DY7 904 aa11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-220ENST00000514830 PANX3Q96QZ0 392 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms