RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	TMEM115	Q12893	351 aa	Predicted RBP	11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	PDK2	Q15119	407 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	HGSNAT	Q68CP4	663 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	CCDC70	Q6NSX1	233 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	PRSS42	Q7Z5A4	293 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	TMC3	Q7Z5M5	1100 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	NT5DC3	Q86UY8	548 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	RAPGEF5	Q92565	580 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	MR1	Q95460	341 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	FATE1	Q969F0	183 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	ZNF830	Q96NB3	372 aa	Predicted RBP	11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	TTC25	Q96NG3	672 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	ZNF670	Q9BS34	389 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	TIMM29	Q9BSF4	260 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	MFRP	Q9BY79	579 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	MAGEE1	Q9HCI5	957 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	ACSS2	Q9NR19	701 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	POT1	Q9NUX5	634 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	UBP1	Q9NZI7	540 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	CTTNBP2NL	Q9P2B4	639 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	TMPRSS11E	Q9UL52	423 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	ZNF711	Q9Y462	761 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	PCDHGA6	Q9Y5G7	932 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	BZW2	Q9Y6E2	419 aa	Known RBP	11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	LRRK2	Q5S007	2527 aa		11.15	□□□□□ -0.62
COPG1-208	ENST00000513965	SPEN	Q96T58	3664 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	NBPF19	A0A087WUL8	3843 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965		A0A1B0GTH6	734 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	UBA6	A0AVT1	1052 aa	Predicted RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965		A6NL46	340 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR89A	B7ZAQ6	455 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	C21orf140	B9A014	251 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	VEGFD	O43915	354 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	PMPCB	O75439	489 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	POP7	O75817	140 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	MT-CYB	P00156	380 aa	Predicted RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR89B	P0CG08	455 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	VCL	P18206	1134 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	KDELR1	P24390	212 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	PTPN4	P29074	926 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	HAL	P42357	657 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	PDE1B	Q01064	536 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	CDK18	Q07002	472 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	GTF2H3	Q13889	308 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	NR1I3	Q14994	352 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	PLCL1	Q15111	1095 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	ATP13A5	Q4VNC0	1218 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	FAM69B	Q5VUD6	431 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	ALKBH5	Q6P6C2	394 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	CLEC17A	Q6ZS10	378 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	APLF	Q8IW19	511 aa	Predicted RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	GALNT11	Q8NCW6	608 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	SPATA22	Q8NHS9	363 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	HDAC11	Q96DB2	347 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	RNF157	Q96PX1	679 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	TRIB3	Q96RU7	358 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	MAP3K3	Q99759	626 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	MAK16	Q9BXY0	300 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	ING2	Q9H160	280 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	CASS4	Q9NQ75	786 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	RAD18	Q9NS91	495 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	FARSA	Q9Y285	508 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	SPO11	Q9Y5K1	396 aa		11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	CFAP20	Q9Y6A4	193 aa	Known RBP	11.14	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A9	O60656	530 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PROSC	O94903	275 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	SERPING1	P05155	500 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	RNF224	P0DH78	156 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A6	P19224	532 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A1	P22309	533 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT1A4	P22310	534 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PBLD	P30039	288 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	ARCN1	P48444	511 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	DCDC1	P59894	354 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	IFI35	P80217	286 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PPID	Q08752	370 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	IL10RA	Q13651	578 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR19	Q15760	415 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	RPE65	Q16518	533 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UGT8	Q16880	541 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PRR30	Q53SZ7	412 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PRAMEF17	Q5VTA0	474 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	AGAP9	Q5VTM2	703 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	FBXO38	Q6PIJ6	1188 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	NPNT	Q6UXI9	565 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	WASH2P	Q6VEQ5	465 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	C11orf96	Q7Z7L8	435 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	AMZ2	Q86W34	360 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	TMEM126B	Q8IUX1	230 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	RBM12B	Q8IXT5	1001 aa	Known RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	GPR150	Q8NGU9	434 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	PRR7	Q8TB68	274 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	SSC4D	Q8WTU2	575 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	THAP4	Q8WY91	577 aa		11.13	□□□□□ -0.63
COPG1-208	ENST00000513965	UBXN4	Q92575	508 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms