RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 OSGEPL1Q9H4B0 414 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 FBXO6Q9NRD1 293 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM114A2Q9NRY5 505 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ZDHHC3Q9NYG2 299 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SIRPGQ9P1W8 387 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 VPS18Q9P253 973 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SPASTQ9UBP0 616 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC23A2Q9UGH3 650 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 NFU1Q9UMS0 254 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 DGKBQ9Y6T7 804 aa9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ASCC3Q8N3C0 2202 aaKnown RBP9.67□□□□□ -0.86
TOPBP1-209ENST00000513818 ZFC3H1O60293 1989 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 UBA6A0AVT1 1052 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 B4DGG1 531 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 TRIM38O00635 465 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 TNFRSF10CO14798 259 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 VEGFDO43915 354 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 EML2O95834 649 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 POLBP06746 335 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 MYBL2P10244 700 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 PAMP19021 973 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 SSTR1P30872 391 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 ACTR1BP42025 376 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 SLC1A2P43004 574 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 BLKP51451 505 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 DRG2P55039 364 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 ACTR1AP61163 376 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 CTBSQ01459 385 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 CTBP1Q13363 440 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 THOC5Q13769 683 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 EFTUD2Q15029 972 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 SEPT7Q16181 437 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 LONRF1Q17RB8 773 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 RSPO4Q2I0M5 234 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 GPR33Q49SQ1 333 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 HSP90AA5PQ58FG0 334 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF789Q5FWF6 425 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 SPANXN3Q5MJ09 141 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 NEPROQ6NW34 567 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 NAPRTQ6XQN6 538 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM83HQ6ZRV2 1179 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 TAF8Q7Z7C8 310 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 LRRTM4Q86VH4 590 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 KCNMB4Q86W47 210 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 NAXDQ8IW45 347 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 LILRA3Q8N6C8 439 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 DEFB124Q8NES8 71 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 PATE1Q8WXA2 126 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 PEX13Q92968 403 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 FAM136AQ96C01 138 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 CERS2Q96G23 380 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 TTC25Q96NG3 672 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 C19orf43Q9BQ61 176 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 ZCCHC2Q9C0B9 1178 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 PPANQ9NQ55 473 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 DOLKQ9UPQ8 538 aa9.66□□□□□ -0.86
TOPBP1-209ENST00000513818 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 IGLV3-16A0A075B6K0 115 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 MAGEB16A2A368 324 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 IQCF5A8MTL0 148 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 CHUKO15111 745 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 YY2O15391 372 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 YKT6O15498 198 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 SIGLEC6O43699 453 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 PCDHGA12O60330 932 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 SNX2O60749 519 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 ANXA6P08133 673 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 ZNF883P0CG24 379 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 PMLP29590 882 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 MAGEA4P43358 317 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 CSE1LP55060 971 aaKnown RBP9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 GPX6P59796 221 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 CAV1Q03135 178 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 ILF3Q12906 894 aaKnown RBP eCLIP9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 NFE2L1Q14494 772 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 ELOCQ15369 112 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 TYSND1Q2T9J0 566 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 CTSL3PQ5NE16 218 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 STEAP4Q687X5 459 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 C11orf96Q7Z7L8 435 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 KRT222Q8N1A0 295 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 KYQ8NBH2 561 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 NETO1Q8TDF5 533 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 PYROXD1Q8WU10 500 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 LRRC39Q96DD0 335 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 FMO2Q99518 471 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 SMYD2Q9NRG4 433 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 KLC4Q9NSK0 619 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 NINJ2Q9NZG7 142 aa9.65□□□□□ -0.86
TOPBP1-209ENST00000513818 TAAR2Q9P1P5 351 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms