RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF514Q96K75 400 aaPredicted RBP12.37□□□□□ -0.43
PDPN-210ENST00000513143 WDR92Q96MX6 357 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 NDNQ99608 321 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CCDC68Q9H2F9 335 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 RMI1Q9H9A7 625 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 GPR34Q9UPC5 381 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 VWA7Q9Y334 891 aa12.37□□□□□ -0.43
PDPN-210ENST00000513143 CUL9Q8IWT3 2517 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 FAM95CA0A1B0GW59 222 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 F8W8V4 182 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
PDPN-210ENST00000513143 FUCA1P04066 466 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 OR56A5P0C7T3 313 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 HTR1BP28222 390 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 PRLHRP49683 370 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 THOP1P52888 689 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 CTSCP53634 463 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDPN-210ENST00000513143 POU4F1Q01851 419 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 PTK2BQ14289 1009 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 BCL7AQ4VC05 210 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 HECTD2Q5U5R9 776 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 PTRHD1Q6GMV3 140 aaKnown RBP12.36□□□□□ -0.43
PDPN-210ENST00000513143 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 TMEM220Q6QAJ8 160 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 ENPP7Q6UWV6 458 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 TIFABQ6ZNK6 161 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 CYP4X1Q8N118 509 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 OR56A4Q8NGH8 313 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 MZB1Q8WU39 189 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 NAT14Q8WUY8 206 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 KCNJ9Q92806 393 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 ELMO2Q96JJ3 720 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 PRRX2Q99811 253 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 PILRBQ9UKJ0 227 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
PDPN-210ENST00000513143 ZFC3H1O60293 1989 aaKnown RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 A0A1B0GTW7 788 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 IQCF5A8MTL0 148 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 PRR5-ARHGAP8B1AHC4 643 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TRIM49D1C9J1S8 452 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TLR4O00206 839 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 VILLO15195 856 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 GRID2O43424 1007 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 FTH1P02794 183 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 GNSP15586 552 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 FDXRP22570 491 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 CSRP3P50461 194 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 AFF3P51826 1226 aaKnown RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 CDKN2DP55273 166 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TAS2R39P59534 338 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 FZD2Q14332 565 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 TMED2Q15363 201 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 PEAR1Q5VY43 1037 aaPredicted RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 TRAPPC5Q8IUR0 188 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 ZNF547Q8IVP9 402 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 OR1E3Q8WZA6 343 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 ISL2Q96A47 359 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 PGM2Q96G03 612 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 LINC00615Q96LM1 132 aaPredicted RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 PANX3Q96QZ0 392 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 OLFM1Q99784 485 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 CAB39LQ9H9S4 337 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TMBIM4Q9HC24 238 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 FGF22Q9HCT0 170 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 LATS2Q9NRM7 1088 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TMEM74BQ9NUR3 256 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 TAS2R13Q9NYV9 303 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 SLC39A10Q9ULF5 831 aa12.35□□□□□ -0.43
PDPN-210ENST00000513143 PCYT1BQ9Y5K3 369 aaPredicted RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 DNMT3AQ9Y6K1 912 aaPredicted RBP12.35□□□□□ -0.43
PDPN-210ENST00000513143 TDRD6O60522 2096 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 PRSS38A1L453 326 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 E5RI56 91 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 KMOO15229 486 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 VPS26AO75436 327 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 ALDOAP04075 364 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 GSTM1P09488 218 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 MYZAPP0CAP1 466 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 CHRM3P20309 590 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 HOXD12P35452 270 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 SKIV2L2P42285 1042 aaKnown RBP12.34□□□□□ -0.43
PDPN-210ENST00000513143 DPP6P42658 865 aa12.34□□□□□ -0.43
PDPN-210ENST00000513143 MAGEA12P43365 314 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms