RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FAM170AA1A519 330 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC169A6NNP5 214 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 C5orf58C9J3I9 102 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM72CH0Y354 149 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 H7C1Q1 480 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM38O00635 465 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDUFAB1O14561 156 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 THAP12O43422 761 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGS10O43665 173 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AKAP8O43823 692 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CREB3O43889 395 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DLX3O60479 287 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 VPS4BO75351 444 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MOSPD3O75425 235 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 BEST1O76090 585 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MFN2O95140 757 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LTFP02788 710 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PROCP04070 461 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LDHBP07195 334 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAPN1P07384 714 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELNP15502 786 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GCFC2P16383 781 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HOXC12P31275 282 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPA3P35244 121 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOX6P35712 828 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEA1P43355 309 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RXRGP48443 463 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HCAR3P49019 387 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMED10P49755 219 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 POLR2FP61218 127 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABCE1P61221 599 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SH3BP2P78314 561 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SIM1P81133 766 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC63Q05C16 580 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AP1B1Q10567 949 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 STARD3Q14849 445 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDK1Q15118 436 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DUSP6Q16828 381 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 C21orf62-AS1Q17RA5 79 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF699Q32M78 642 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLA2G4EQ3MJ16 856 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC153Q494R4 210 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSP90AA4PQ58FG1 418 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATAD3BQ5T9A4 648 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DEPDC1Q5TB30 811 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM72AQ5TYM5 149 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM72DQ6L9T8 149 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCD5Q86SK9 330 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC30AQ86WT1 665 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM72BQ86X60 149 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM48Q8IWZ4 208 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYTL1Q8IYJ3 562 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KATNAL2Q8IYT4 538 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DCBLD1Q8N8Z6 715 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR4C15Q8NGM1 316 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR6F1Q8NGZ6 308 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 JOSD2Q8TAC2 188 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TESCQ96BS2 214 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ITCHQ96J02 903 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELMO2Q96JJ3 720 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAJC1Q96KC8 554 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNBD2Q96M20 576 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TACO1Q9BSH4 297 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALG1Q9BT22 464 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPON2Q9BUD6 331 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 APOL6Q9BWW8 343 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GBA3Q9H227 469 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EXO5Q9H790 373 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRDE2Q9H7Z3 1164 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC4Q9HBW1 653 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EXOSC4Q9NPD3 245 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KMT5AQ9NQR1 393 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 VPS45Q9NRW7 570 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLAMF8Q9P0V8 285 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HCN3Q9P1Z3 774 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABI3Q9P2A4 366 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRMT112Q9UI30 125 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABT1Q9ULW3 272 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX6Q9UNH7 406 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SH3GLB1Q9Y371 365 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPTBP11277 2137 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 A0A087WZ62 844 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR2W5A6NFC9 320 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF701M0R085 212 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARVCFO00192 962 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MATN2O00339 956 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBX3O15119 743 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANGPT2O15123 496 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADAM11O75078 769 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP6V1G1O75348 118 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RBMXL2O75526 392 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR47O94967 919 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CBX6O95503 412 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRAMEF12O95522 483 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GALT4O96024 378 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOD1P00441 154 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 APOC1P02654 83 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPX3P22352 226 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EEF1B2P24534 225 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms