RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TBC1D29Q9UFV1 150 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 SLC23A2Q9UGH3 650 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZNHIT2Q9UHR6 403 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 ZNF711Q9Y462 761 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 LOXL2Q9Y4K0 774 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 PCDHGA7Q9Y5G6 932 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 PCDHA3Q9Y5H8 950 aa5.76□□□□□ -1.49
RNF4-217ENST00000511892 PRRC2CQ9Y520 2896 aaKnown RBP5.76□□□□□ -1.49
RNF4-217ENST00000511892 CCDC88CQ9P219 2028 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 FLNCQ14315 2725 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PRAMEF33A0A0G2JMD5 474 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 TEX51A0A1B0GUA7 166 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PRR19A6NJB7 356 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 C9orf172C9J069 976 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 F5H423 210 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 CHUKO15111 745 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ATXN7O15265 892 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 NVLO15381 856 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 GRID2O43424 1007 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 NUAK1O60285 661 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PRAMEF10O60809 474 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 C1QL1O75973 258 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 SLC25A14O95258 325 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 SLC4A1P02730 911 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PRB1P04280 392 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ACP5P13686 325 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 MPSTP25325 297 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 TNFRSF8P28908 595 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 CTNNA1P35221 906 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 CHRNA4P43681 627 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ARSDP51689 593 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 LIMK2P53671 638 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 WNT3AP56704 352 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 DCDC1P59894 354 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 SRSF6Q13247 344 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 SQSTM1Q13501 440 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PEX6Q13608 980 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 NAA30Q147X3 362 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 TGIF1Q15583 401 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 CLPPQ16740 277 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 ATP13A5Q4VNC0 1218 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 KHDC1Q4VXA5 237 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 PHF19Q5T6S3 580 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ARHGAP40Q5TG30 622 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 BROXQ5VW32 411 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 AADACL2Q6P093 401 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 IYDQ6PHW0 289 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 BBS12Q6ZW61 710 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 BZW1Q7L1Q6 419 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 GPR155Q7Z3F1 870 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ADGRG6Q86SQ4 1221 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 DAAM2Q86T65 1068 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PIM3Q86V86 326 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ZC3H18Q86VM9 953 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 JAMLQ86YT9 394 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 CCDC50Q8IVM0 306 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ZNF547Q8IVP9 402 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 TTC30BQ8N4P2 665 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 TRAM1L1Q8N609 369 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 UBL4BQ8N7F7 174 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 LRRN4CLQ8ND94 238 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 RCBTB1Q8NDN9 531 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 OR4D9Q8NGE8 314 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 SNRNP27Q8WVK2 155 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 HTR3CQ8WXA8 447 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 P3H4Q92791 437 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 USP7Q93009 1102 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 GLYATL1Q969I3 302 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PMEPA1Q969W9 287 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 HES6Q96HZ4 224 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 RBM41Q96IZ5 413 aaKnown RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 CCDC74BQ96LY2 380 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 RUNDC3BQ96NL0 473 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 FCRL5Q96RD9 977 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ZSCAN5AQ9BUG6 496 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PARD6BQ9BYG5 372 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 GPR63Q9BZJ6 419 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ACBD3Q9H3P7 528 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ANKZF1Q9H8Y5 726 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 RMI1Q9H9A7 625 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 TRIM39Q9HCM9 518 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 BPIFA1Q9NP55 256 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 KCNK4Q9NYG8 393 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 OGFRQ9NZT2 677 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 FOXJ2Q9P0K8 574 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 PISDQ9UG56 409 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.75□□□□□ -1.49
RNF4-217ENST00000511892 FAM153AQ9UHL3 310 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 ACSL6Q9UKU0 697 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 KCNK6Q9Y257 313 aa5.75□□□□□ -1.49
RNF4-217ENST00000511892 V9GYY5 206 aaPredicted RBP5.75□□□□□ -1.49
RNF4-217ENST00000511892 SEC16AO15027 2179 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 RELNP78509 3460 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 CCDC66A2RUB6 948 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 HACD1B0YJ81 288 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 K7ENP7 123 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 APOC4-APOC2K7ER74 178 aa5.74□□□□□ -1.49
RNF4-217ENST00000511892 PGRMC1O00264 195 aaKnown RBP5.74□□□□□ -1.49
RNF4-217ENST00000511892 GAPDHSO14556 408 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms