RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 HSD11B2P80365 405 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 TYRO3Q06418 890 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 RAPSNQ13702 412 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 GPR18Q14330 331 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 MYBPC3Q14896 1274 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 KYNUQ16719 465 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 HENMT1Q5T8I9 393 aaKnown RBP11.34□□□□□ -0.59
RNF4-216ENST00000511859 MARC1Q5VT66 337 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 SPNS3Q6ZMD2 512 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 RAB43Q86YS6 212 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 D2HGDHQ8N465 521 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 SLC38A9Q8NBW4 561 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 CPT1BQ92523 772 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 CXorf40BQ96DE9 158 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 FER1L6-AS2Q96M78 137 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 MLPHQ9BV36 600 aaPredicted RBP11.34□□□□□ -0.59
RNF4-216ENST00000511859 TRIM39Q9HCM9 518 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 LATS2Q9NRM7 1088 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
RNF4-216ENST00000511859 TCRBV5S1A1TA0A578 114 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 PDZK1P1A8MUH7 402 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 FADS2P1A8MWK0 482 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 CHUKO15111 745 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 KMOO15229 486 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 MAFKO60675 156 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 GFPT2O94808 682 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 CLDN7O95471 211 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 IGHEP01854 428 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 IDSP22304 550 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 HNRNPH3P31942 346 aaKnown RBP11.33□□□□□ -0.6
RNF4-216ENST00000511859 MMP13P45452 471 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 SPINT3P49223 89 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 CDH6P55285 790 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 STX1AQ16623 288 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
RNF4-216ENST00000511859 INSCQ1MX18 579 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 PLEKHS1Q5SXH7 462 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 TMTC4Q5T4D3 741 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 AGAP9Q5VTM2 703 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 HGSNATQ68CP4 663 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 DNAJC24Q6P3W2 148 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 DCUN1D2Q6PH85 259 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
RNF4-216ENST00000511859 DSELQ8IZU8 1212 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNF4-216ENST00000511859 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
RNF4-216ENST00000511859 POM121Q96HA1 1249 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 AGAP3Q96P47 875 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 MCEEQ96PE7 176 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 WDR24Q96S15 920 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 CD180Q99467 661 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 ZNF552Q9H707 407 aaPredicted RBP11.33□□□□□ -0.6
RNF4-216ENST00000511859 CHST11Q9NPF2 352 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 GPATCH2LQ9NWQ4 482 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 PKD2L2Q9NZM6 624 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 SLC23A2Q9UGH3 650 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 NTNG1Q9Y2I2 539 aa11.33□□□□□ -0.6
RNF4-216ENST00000511859 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 TLCD2A6NGC4 264 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 VEGFDO43915 354 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 STSP08842 583 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 BRAFP15056 766 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 ZNF7P17097 686 aaPredicted RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 CES1P23141 567 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 HADHAP40939 763 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 TESK1Q15569 626 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 CA9Q16790 459 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 CLEC16AQ2KHT3 1053 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 ANO6Q4KMQ2 910 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 ANKRD20A8PQ5CZ79 823 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 LCN10Q6JVE6 187 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 CUZD1Q86UP6 607 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 LRRTM4Q86VH4 590 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 GALNT16Q8N428 558 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 COG1Q8WTW3 980 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 INPP5DQ92835 1189 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 SMIM14Q96QK8 99 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 MAP3K3Q99759 626 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 TIMM29Q9BSF4 260 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 OR2AG1Q9H205 316 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
RNF4-216ENST00000511859 ANKHD1Q8IWZ3 2542 aaKnown RBP11.32□□□□□ -0.6
RNF4-216ENST00000511859 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
RNF4-216ENST00000511859 ZBTB11O95625 1053 aaPredicted RBP11.31□□□□□ -0.6
RNF4-216ENST00000511859 CAPN1P07384 714 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms