RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 C12orf66Q96MD2 445 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PTCHD1Q96NR3 888 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TGM7Q96PF1 710 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ACOX2Q99424 681 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LPAR4Q99677 370 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ZNF559Q9BR84 538 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 UTP23Q9BRU9 249 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ZNF670Q9BS34 389 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TSPYL1Q9H0U9 437 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LRRC40Q9H9A6 602 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 KCNJ16Q9NPI9 418 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SAMSN1Q9NSI8 373 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 KLC4Q9NSK0 619 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GPATCH2LQ9NWQ4 482 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 COPG2Q9UBF2 871 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 COPS7AQ9UBW8 275 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 NDRG3Q9UGV2 375 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PCSK1NQ9UHG2 260 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GNPTGQ9UJJ9 305 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ERRFI1Q9UJM3 462 aaPredicted RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 INTUQ9ULD6 942 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TTC7AQ9ULT0 858 aaPredicted RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ASF1AQ9Y294 204 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DNAJC16Q9Y2G8 782 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 FCF1Q9Y324 198 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PTRH2Q9Y3E5 179 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PCDHB1Q9Y5F3 818 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PATJQ8NI35 1801 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 NSG1A0A0A6YYJ2 146 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 A0A0A6YYK5 440 aaPredicted RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TRGV8A0A0C4DH27 118 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GLYATL1P3A0A0U1RQE8 302 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 A0A1W2PR77 199 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PRR19A6NJB7 356 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GOLGA8MH3BSY2 632 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TRAFD1O14545 582 aaPredicted RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LDB2O43679 373 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ZBTB14O43829 449 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 CREG1O75629 220 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 S1PR4O95977 384 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SLC35G6P0C7Q6 338 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PLA2G2AP14555 144 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 UCHL3P15374 230 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 FBLP22087 321 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ALAS2P22557 587 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 STIP1P31948 543 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 NSG1P42857 185 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TTPAP49638 278 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 POLE2P56282 527 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TUBB4BP68371 445 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DPTQ07507 201 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PPP3CAQ08209 521 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SQSTM1Q13501 440 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TUBB2AQ13885 445 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 INPP5AQ14642 412 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 IQCB1Q15051 598 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PTPRNQ16849 979 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 EARS2Q5JPH6 523 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 AGAP9Q5VTM2 703 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DENND1BQ6P3S1 775 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 OGFOD3Q6PK18 319 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DBX2Q6ZNG2 339 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GK5Q6ZS86 529 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 RFX8Q6ZV50 586 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LIMS2Q7Z4I7 341 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SLCO6A1Q86UG4 719 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ADIPOR2Q86V24 386 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 GPALPP1Q8IXQ4 340 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DND1Q8IYX4 353 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 OR6P1Q8NGX9 317 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LRRC15Q8TF66 581 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TSACCQ96A04 125 aaPredicted RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 FKBP10Q96AY3 582 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SARAFQ96BY9 339 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 MVB12AQ96EY5 273 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 DTD2Q96FN9 168 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 CABS1Q96KC9 395 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 LRFN5Q96NI6 719 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 C19orf43Q9BQ61 176 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 NAT9Q9BTE0 207 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 TUBB2BQ9BVA1 445 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 BOCQ9BWV1 1114 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 CARD6Q9BX69 1037 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 CNOT10Q9H9A5 744 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 C3orf14Q9HBI5 128 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ANKHQ9HCJ1 492 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SDHAF3Q9NRP4 125 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 SPATA7Q9P0W8 599 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 MAN1B1Q9UKM7 699 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 THADAQ6YHU6 1953 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 A0A0U1RQJ8 604 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ARHGAP10A1A4S6 786 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 MAGEB16A2A368 324 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 CTAGE9A4FU28 777 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PRSS44E7EML9 344 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 IGLV3-27P01718 113 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 KLKB1P03952 638 aa2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PABPC4LP0CB38 370 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 ENDOUP21128 410 aaKnown RBP2.8□□□□□ -1.96
CLOCK-209ENST00000511124 PTPN4P29074 926 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms