RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 M0R233 179 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 CBX4O00257 560 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 FBP2O00757 339 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 PRR5P85299 388 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GRIK2Q13002 908 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 DAG1Q14118 895 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ZNF234Q14588 700 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 KCNA10Q16322 511 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC22A10Q63ZE4 541 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MSANTD1Q6ZTZ1 278 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC34A3Q8N130 599 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 DCAKDQ8WVC6 231 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ACSF2Q96CM8 615 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 EBF3Q9H4W6 596 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 KCNIP3Q9Y2W7 256 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 RPL4P36578 427 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 ZFPM1Q8IX07 1006 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PLEKHA6Q9Y2H5 1048 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 DEPDC5O75140 1603 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC12A8A0AV02 714 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 OR2AT4A6NND4 320 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PSIP1O75475 530 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 OR5F1O95221 314 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 REP15Q6BDI9 236 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 USP30Q70CQ3 517 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 CCSER2Q9H7U1 834 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 THG1LQ9NWX6 298 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 CD86P42081 329 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 BTN3A2P78410 334 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TIFABQ6ZNK6 161 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 RTL4Q6ZR62 310 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TOP6BLQ8N6T0 577 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 KAT2AQ92830 837 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PRMT6Q96LA8 375 aaPredicted RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 HNRNPABQ99729 332 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TRPV2Q9Y5S1 764 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PPEF2O14830 753 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SGCGQ13326 291 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 C10orf82Q8WW14 230 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 AP2M1Q96CW1 435 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 ACTR3BQ9P1U1 418 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 EIF3KQ9UBQ5 218 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 UBQLN2Q9UHD9 624 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SCGNO76038 276 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CTBP2P56545 445 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 FMO1Q01740 532 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CTXN3Q4LDR2 81 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SLC41A1Q8IVJ1 513 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CDC25CP30307 473 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 RPL38P63173 70 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 LPCAT4Q643R3 524 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PRAMEF33A0A0G2JMD5 474 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SLC19A2O60779 497 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PRAMEF10O60809 474 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 LCN1P31025 176 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CACNG1Q06432 222 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 DCST1Q5T197 706 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 GARNL3Q5VVW2 1013 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 MARVELD2Q8N4S9 558 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 OR4L1Q8NH43 312 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 GDAP2Q9NXN4 497 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 B4GALT4O60513 344 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SEPHS1P49903 392 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 DUS1LQ6P1R4 473 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 HID1Q8IV36 788 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 LGR4Q9BXB1 951 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 COMMD4Q9H0A8 199 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TAS2R14Q9NYV8 317 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TMEM59LQ9UK28 342 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PCDHGB5Q9Y5G0 923 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 A0A087X0B3 334 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PLIN3O60664 434 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TACSTD2P09758 323 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 IMPDH1P20839 514 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 MAZP56270 477 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SETMARQ53H47 684 aaPredicted RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 ULK3Q6PHR2 472 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 NUFIP1Q9UHK0 495 aaKnown RBP8.29□□□□□ -1.08
HTT-208ENST00000510626 PROM1O43490 865 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 HPRP00739 348 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SCNN1AP37088 669 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SLC1A2P43004 574 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 ATP4BP51164 291 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SYNE4Q8N205 404 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 TTLQ8NG68 377 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 HDAC10Q969S8 669 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 ZNF487B1APH4 448 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 H3BUI4 141 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 SLITRK5O94991 958 aa8.29□□□□□ -1.08
HTT-208ENST00000510626 CD2P06729 351 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms