RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PCSK4Q6UW60 755 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 RANBP10Q6VN20 620 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 C11orf96Q7Z7L8 435 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 CCDC112Q8NEF3 446 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 TAAR9Q96RI9 348 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 ZCCHC2Q9C0B9 1178 aaKnown RBP22.61■■□□□ 1.21
SNF8-209ENST00000510558 EPB41L1Q9H4G0 881 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 ARL5AQ9Y689 179 aa22.61■■□□□ 1.21
SNF8-209ENST00000510558 FTCDO95954 541 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 XRCC1P18887 633 aaPredicted RBP22.6■■□□□ 1.21
SNF8-209ENST00000510558 SLC19A1P41440 591 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 TAF1AQ15573 450 aaPredicted RBP22.6■■□□□ 1.21
SNF8-209ENST00000510558 TRIM48Q8IWZ4 208 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 DDHD1Q8NEL9 900 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 ART4Q93070 314 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 PMEPA1Q969W9 287 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 UCK1Q9HA47 277 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 OCIAD1Q9NX40 245 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 ZNF624Q9P2J8 865 aaPredicted RBP22.6■■□□□ 1.21
SNF8-209ENST00000510558 PCDHGA3Q9Y5H0 932 aa22.6■■□□□ 1.21
SNF8-209ENST00000510558 GOLGA6L9A6NEM1 432 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 C2orf81A6NN90 581 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 A8MU76 341 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 DDX3YO15523 660 aaKnown RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 EFSO43281 561 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 ZNF189O75820 626 aaPredicted RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 VIPP01282 170 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 PRB1P04280 392 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 PTMAP06454 111 aaKnown RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 BRAFP15056 766 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 VCLP18206 1134 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 LPOP22079 712 aaPredicted RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 IDSP22304 550 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 RPL10P27635 214 aaKnown RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 SRSF6Q13247 344 aaKnown RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 GPRC6AQ5T6X5 926 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 ABRAXAS1Q6UWZ7 409 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 WASH2PQ6VEQ5 465 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 TMEM26Q6ZUK4 368 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 ARHGAP22Q7Z5H3 698 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 FAM129CQ86XR2 697 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 DTX1Q86Y01 620 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 RASGEF1AQ8N9B8 481 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 TTC13Q8NBP0 860 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 PPP1R2P1Q96PQ5 205 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 WASH6PQ9NQA3 447 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 SMOXQ9NWM0 555 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 SLC39A1Q9NY26 324 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 PCDHB11Q9Y5F2 797 aa22.59■■□□□ 1.21
SNF8-209ENST00000510558 SMG1Q96Q15 3661 aaKnown RBP22.59■■□□□ 1.21
SNF8-209ENST00000510558 C5orf60A6NFR6 353 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 EFCAB7A8K855 629 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 B4E171 279 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 PRAMEF1O95521 474 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 TSPAN7P41732 249 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 ARSDP51689 593 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 CTSCP53634 463 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 DRG2P55039 364 aaKnown RBP22.58■■□□□ 1.21
SNF8-209ENST00000510558 TAF1BQ53T94 588 aaPredicted RBP22.58■■□□□ 1.21
SNF8-209ENST00000510558 AGAP9Q5VTM2 703 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 KIAA1614Q5VZ46 1190 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 OR4K2Q8NGD2 314 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 ZNF398Q8TD17 642 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 TBL1YQ9BQ87 522 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 DDA1Q9BW61 102 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 POT1Q9NUX5 634 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 B3GALT1Q9Y5Z6 326 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 CAPN6Q9Y6Q1 641 aa22.58■■□□□ 1.21
SNF8-209ENST00000510558 FASNP49327 2511 aaKnown RBP22.57■■□□□ 1.2
SNF8-209ENST00000510558 STMND1H3BQB6 276 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 KCNJ13O60928 360 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 KLF1Q13351 362 aaPredicted RBP22.57■■□□□ 1.2
SNF8-209ENST00000510558 MANEAQ5SRI9 462 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 VASH2Q86V25 355 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 AMZ2Q86W34 360 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 BMPERQ8N8U9 685 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 TTC9Q92623 222 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 OGFRQ9NZT2 677 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 KLHL3Q9UH77 587 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 FKBPLQ9UIM3 349 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 KCTD3Q9Y597 815 aa22.57■■□□□ 1.2
SNF8-209ENST00000510558 MN1Q10571 1320 aaPredicted RBP22.57■■□□□ 1.2
SNF8-209ENST00000510558 OR2AG2A6NM03 316 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 OR52A4PA6NMU1 304 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 GOLGA6L6A8MZA4 724 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 POP7O75817 140 aaKnown RBP22.56■■□□□ 1.2
SNF8-209ENST00000510558 AKT1P31749 480 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 RAB15P59190 212 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 DMPKQ09013 629 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 MSLNQ13421 630 aaPredicted RBP22.56■■□□□ 1.2
SNF8-209ENST00000510558 SPARCL1Q14515 664 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 DENND5AQ6IQ26 1287 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 TMEM220Q6QAJ8 160 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 PLXDC1Q8IUK5 500 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 KLHDC8BQ8IXV7 354 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 FAM71DQ8N9W8 422 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 CXorf40BQ96DE9 158 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 WBP1Q96G27 269 aa22.56■■□□□ 1.2
SNF8-209ENST00000510558 HES6Q96HZ4 224 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms