RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 LRIT3Q3SXY7 679 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FUT11Q495W5 492 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 NADK2Q4G0N4 442 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CCDC152Q4G0S7 254 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 AKNAD1Q5T1N1 836 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM171A1Q5VUB5 890 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM160B1Q5W0V3 765 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 RAET1GQ6H3X3 334 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 MIS18BP1Q6P0N0 1132 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 WDR88Q6ZMY6 472 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 TOM1L2Q6ZVM7 507 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SPATA21Q7Z572 469 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 PPP1R32Q7Z5V6 425 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ABI3BPQ7Z7G0 1075 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF410Q86VK4 478 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF573Q86YE8 665 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 GUF1Q8N442 669 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 OR2T3Q8NH03 318 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 AKR7LQ8NHP1 331 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HUS1BQ8NHY5 278 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SUN3Q8TAQ9 357 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 SMG7Q92540 1137 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 INPP5DQ92835 1189 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FBXO32Q969P5 355 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 MIB2Q96AX9 1013 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 PHF21BQ96EK2 531 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 AIFM2Q9BRQ8 373 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 KLK15Q9H2R5 256 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HAUS4Q9H6D7 363 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 GALNT9Q9HCQ5 603 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 IL17RBQ9NRM6 502 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 ERAP1Q9NZ08 941 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 FOXJ2Q9P0K8 574 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 PEMTQ9UBM1 199 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 HDAC6Q9UBN7 1215 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 CNOT8Q9UFF9 292 aaKnown RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 TRPC5Q9UL62 973 aaPredicted RBP4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 EXOC6BQ9Y2D4 811 aa4.28□□□□□ -1.72
SMARCA5-202ENST00000508573 NPHP3Q7Z494 1330 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 A0A087WZY1 265 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 A0A1W2PRG0 241 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 NPIPB13A6NJU9 1138 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF716A6NP11 495 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 NPIPB4C9JG80 1138 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ADM5C9JUS6 153 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ATP2A1O14983 1001 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 DCLK1O15075 740 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC16A3O15427 465 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PJA2O43164 708 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CTIFO43310 598 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 MED7O43513 233 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RGS10O43665 173 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 MED24O75448 989 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RHBDL1O75783 438 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 C1QL1O75973 258 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CHEK2O96017 543 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 LCATP04180 440 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF735P0CB33 412 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RALAP11233 206 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CYP2C9P11712 490 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 MMP9P14780 707 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 IL2RBP14784 551 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CKMT2P17540 419 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 BMI1P35226 326 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SERPINB6P35237 376 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ARHGAP25P42331 645 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 MVDP53602 400 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 F2RL1P55085 397 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 GAD2Q05329 585 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 LIPEQ05469 1076 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CCDC173Q0VFZ6 552 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ABRQ12979 859 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 BYSLQ13895 437 aaKnown RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RCN1Q15293 331 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CNGA3Q16281 694 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 ZSCAN23Q3MJ62 389 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 XKR3Q5GH77 459 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 TMEM196Q5HYL7 178 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CFAP157Q5JU67 520 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 WBP2NLQ6ICG8 309 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SULT1C3Q6IMI6 304 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC27A1Q6PCB7 646 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 TSSK4Q6SA08 328 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 DGLUCYQ7Z3D6 616 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CENPVQ7Z7K6 275 aaPredicted RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC15A3Q8IY34 581 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 PM20D2Q8IYS1 436 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 BATF2Q8N1L9 274 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 RASGEF1AQ8N9B8 481 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 HJURPQ8NCD3 748 aaPredicted RBP4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 OR9A1PQ8NGU1 263 aa4.27□□□□□ -1.73
SMARCA5-202ENST00000508573 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms