RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ZBTB42B2RXF5 422 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 C22orf46C9J442 243 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 GOLGA8KD6RF30 607 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 F2RL2O00254 374 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 IGF2BP3O00425 579 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PDE5AO76074 875 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PDE9AO76083 593 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 SEMA3DO95025 777 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 SRMP19623 302 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PKLRP30613 574 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 CDK7P50613 346 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC7A2P52569 658 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 ARSFP54793 590 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PHEXP78562 749 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 ABHD18Q0P651 414 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 RUNX2Q13950 521 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PLAG1Q6DJT9 500 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 RAB44Q7Z6P3 723 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 MFN1Q8IWA4 741 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 FSIP1Q8NA03 581 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 CPA5Q8WXQ8 436 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 PGBD1Q96JS3 809 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 CIB1Q99828 191 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 MFFQ9GZY8 342 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 GLOD4Q9HC38 313 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 ERVK-18Q9QC07 812 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 HEY2Q9UBP5 337 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 TRPC5Q9UL62 973 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 ZFYVE16Q7Z3T8 1539 aa7.43□□□□□ -1.22
PDGFRA-206ENST00000508170 RTEL1-TNFRSF6BF6WH68 1400 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 BLMP54132 1417 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TRAPPC8Q9Y2L5 1435 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MAPK8IP3Q9UPT6 1336 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TEX13CA0A0J9YWL9 993 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TEX22C9J3V5 150 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF701M0R085 212 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SCAMP2O15127 329 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 DHHO43323 396 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TLX3O43711 291 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 LIASO43766 372 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CALUO43852 315 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 KLK8O60259 260 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 GPR32O75388 356 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 GH1P01241 217 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 RLN1P04808 185 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 UGT2B4P06133 528 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 GPTP24298 496 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 RORAP35398 523 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CEBPDP49716 269 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ENPEPQ07075 957 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MERTKQ12866 999 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TP53BP2Q13625 1128 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC29A2Q14542 456 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 FCRL6Q6DN72 434 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 USP30Q70CQ3 517 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 GAREM2Q75VX8 874 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CCDC25Q86WR0 208 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 FADS6Q8N9I5 356 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF680Q8NEM1 530 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TMEM185AQ8NFB2 350 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 WDR60Q8WVS4 1066 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 HOXB13Q92826 284 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TMA16Q96EY4 203 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MCRS1Q96EZ8 462 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 EFHD1Q9BUP0 239 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TRIM4Q9C037 500 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 LACRTQ9GZZ8 138 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 RUBCNLQ9H714 662 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 USP29Q9HBJ7 922 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 STOML1Q9UBI4 398 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 RGS17Q9UGC6 210 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CHMP2BQ9UQN3 213 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 DEPDC5O75140 1603 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TRPM2O94759 1503 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 A0A087WWL8 130 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ARHGEF35A5YM69 484 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF264O43296 627 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SNNO75324 88 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 COX7A2P14406 83 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CTPS1P17812 591 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MAOBP27338 520 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MSX1P28360 303 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SERPINH1P50454 418 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 BCAP31P51572 246 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 LSAMPQ13449 338 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 UBAP2LQ14157 1087 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF789Q5FWF6 425 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PRAMEF9Q5VWM5 478 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 KIAA1841Q6NSI8 718 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 HMBOX1Q6NT76 420 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 COLCA1Q6ZS62 124 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MISPQ8IVT2 679 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 CCNYL1Q8N7R7 359 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 TMIEQ8NEW7 156 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 OR52B4Q8NGK2 314 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 NDNFQ8TB73 568 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms