RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NR1D1P20393 614 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 OR1D2P34982 312 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CDKN2BP42772 138 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 RPL21P46778 160 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ALDH1A3P47895 512 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 KCNJ1P48048 391 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CXCR3P49682 368 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 IFI35P80217 286 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 EGR3Q06889 387 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 EIF4EBP2Q13542 120 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 KRTCAP3Q53RY4 240 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 BSPRYQ5W0U4 402 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 RGS9BPQ6ZS82 235 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 BBS12Q6ZW61 710 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 TAS1R1Q7RTX1 841 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 SCN4BQ8IWT1 228 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 GALNT4Q8N4A0 578 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ARFGAP1Q8N6T3 406 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 EMC1Q8N766 993 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 LEMD2Q8NC56 503 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 KCTD6Q8NC69 237 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 AZIN2Q96A70 460 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 VPS50Q96JG6 964 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 HAPLN3Q96S86 360 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 IL21RQ9HBE5 538 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 MALT1Q9UDY8 824 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 FBXW11Q9UKB1 542 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 FZD10Q9ULW2 581 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 TIMM22Q9Y584 194 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 C3orf70A6NLC5 250 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 YJEFN3A6XGL0 299 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 E7ENQ6 273 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 NRG2O14511 850 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ACTL6BO94805 426 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ATP5BP06576 529 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 HOXA9P31269 272 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 DPP6P42658 865 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 DIO1P49895 249 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 GALK1P51570 392 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 PMS2P54278 862 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CACNA2D1P54289 1103 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 EPHB3P54753 998 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 EIF3BP55884 814 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 GNGT1P63211 74 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 XRCC4Q13426 336 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 AAK1Q2M2I8 961 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 PABPC1LQ4VXU2 614 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 DCAF6Q58WW2 860 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 THEMIS2Q5TEJ8 643 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 TRNP1Q6NT89 227 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CEP128Q6ZU80 1094 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 TMEM173Q86WV6 379 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 FAM90A1Q86YD7 464 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CDYL2Q8N8U2 506 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 STKLD1Q8NE28 680 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 C1orf54Q8WWF1 131 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ARNTL2Q8WYA1 636 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ART4Q93070 314 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 NAF1Q96HR8 494 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CFAP57Q96MR6 1250 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 TGS1Q96RS0 853 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 SYT3Q9BQG1 590 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 CENPHQ9H3R5 247 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 ARHGEF38Q9NXL2 777 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 MTRF1LQ9UGC7 380 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 SLC12A6Q9UHW9 1150 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 WASF3Q9UPY6 502 aa7.1□□□□□ -1.27
CLCN3-206ENST00000507875 HBS1LQ9Y450 684 aaKnown RBP7.1□□□□□ -1.27
CLCN3-206ENST00000507875 H7C0S8 307 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 M0QYT0 321 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 OIP5O43482 229 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ACSL4O60488 711 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 VNN2O95498 520 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 LATS1O95835 1130 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ESR1P03372 595 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 FYNP06241 537 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 NUDT17P0C025 328 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 OR4Q2P0C623 313 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ARL4AP40617 200 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ROM1Q03395 351 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 LAMB3Q13751 1172 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 KRT81Q14533 505 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ZNF674Q2M3X9 581 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 MGAT5BQ3V5L5 792 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 EMC4Q5J8M3 183 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 AGBL2Q5U5Z8 902 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 DAB2IPQ5VWQ8 1189 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PRSS55Q6UWB4 352 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CYP4V2Q6ZWL3 525 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 GPRIN1Q7Z2K8 1008 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ACMSDQ8TDX5 336 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CLEC4CQ8WTT0 213 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 FBXO32Q969P5 355 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 HAUS1Q96CS2 278 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 FAM46AQ96IP4 442 aaKnown RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 FCRL2Q96LA5 508 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 KLHL5Q96PQ7 755 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms