RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PAQR3Q6TCH7 311 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 SH2D5Q6ZV89 423 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 ARFGAP2Q8N6H7 521 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 TMEM105Q8N8V8 129 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 MGARPQ8TDB4 240 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 KCTD4Q8WVF5 259 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 INPP5DQ92835 1189 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 FOXJ1Q92949 421 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 SCYL1Q96KG9 808 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 EBF2Q9HAK2 575 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 POPDC3Q9HBV1 291 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 SYTL2Q9HCH5 934 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 SSU72Q9NP77 194 aaKnown RBP17.23■□□□□ 0.35
RNF4-209ENST00000507784 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 MOSPD1Q9UJG1 213 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 PIKFYVEQ9Y2I7 2098 aa17.23■□□□□ 0.35
RNF4-209ENST00000507784 POM121BA6NF01 834 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 METTL12A8MUP2 240 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 MEI4A8MW99 385 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 QSOX1O00391 747 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 GLRA3O75311 464 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 FTH1P02794 183 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 SLC35E2BP0CK96 405 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 CCDC166P0CW27 439 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 ZNF8P17098 575 aaPredicted RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 TRIM23P36406 574 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 SKIV2L2P42285 1042 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 CTSCP53634 463 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 CSHL1Q14406 222 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 C16orf46Q6P387 395 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 CRTC3Q6UUV7 619 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 NAPRTQ6XQN6 538 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 TRAPPC5Q8IUR0 188 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 C1orf210Q8IVY1 113 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 PLD6Q8N2A8 252 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 SPATA6LQ8N4H0 392 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 BEND7Q8N7W2 519 aaPredicted RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 DTWD2Q8NBA8 298 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 TCP10LQ8TDR4 215 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 KCNJ9Q92806 393 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 NXNL1Q96CM4 212 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 SLC30A3Q99726 388 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 UNKQ9C0B0 810 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 C12orf65Q9H3J6 166 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 PRMT8Q9NR22 394 aaPredicted RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 SPATS2LQ9NUQ6 558 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 FAM8A1Q9UBU6 413 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 TSR3Q9UJK0 312 aaKnown RBP17.22■□□□□ 0.35
RNF4-209ENST00000507784 DMTF1Q9Y222 760 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 DHRS7Q9Y394 339 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 HS3ST3A1Q9Y663 406 aa17.22■□□□□ 0.35
RNF4-209ENST00000507784 H0Y8X5 98 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 PRPF4O43172 522 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF4-209ENST00000507784 TYROBPO43914 113 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 MAGEC1O60732 1142 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 TOP3BO95985 862 aaKnown RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 LTA4HP09960 611 aaKnown RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 BCKDHBP21953 392 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 CRHR1P34998 444 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 RPA3P35244 121 aaPredicted RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 NUDT1P36639 197 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 IRX4P78413 519 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 TMEM207Q6UWW9 146 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 GCNT7Q6ZNI0 430 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 OTOAQ7RTW8 1153 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 WDR5BQ86VZ2 330 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 CPNE9Q8IYJ1 553 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 NKAPQ8N5F7 415 aaKnown RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 ZBTB2Q8N680 514 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 CCDC63Q8NA47 563 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 MDM1Q8TC05 714 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 ELMO1Q92556 727 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 BMFQ96LC9 184 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 PAIP2Q9BPZ3 127 aaKnown RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 CCM2Q9BSQ5 444 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 AASDHPPTQ9NRN7 309 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 GRID1Q9ULK0 1009 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 MED16Q9Y2X0 877 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.21■□□□□ 0.35
RNF4-209ENST00000507784 PLXND1Q9Y4D7 1925 aa17.21■□□□□ 0.35
RNF4-209ENST00000507784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 A0A1W2PPC4 97 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 SGTAO43765 313 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 KLHL2O95198 593 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 GSTA1P08263 222 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 COL6A2P12110 1019 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 CD9P21926 228 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 HOXA6P31267 233 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 GLRBP48167 497 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 CSRP3P50461 194 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 CLCN7P51798 805 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 THOP1P52888 689 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 BOP1Q14137 746 aaKnown RBP17.2■□□□□ 0.34
RNF4-209ENST00000507784 PLA2G4EQ3MJ16 856 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
RNF4-209ENST00000507784 N4BP2L1Q5TBK1 243 aaPredicted RBP17.2■□□□□ 0.34
RNF4-209ENST00000507784 HHATQ5VTY9 493 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms