RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 WASH6PQ9NQA3 447 aa14.16□□□□□ -0.14
CDC42SE2-209ENST00000506419 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
CDC42SE2-209ENST00000506419 PILRAQ9UKJ1 303 aa14.16□□□□□ -0.14
CDC42SE2-209ENST00000506419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
CDC42SE2-209ENST00000506419 KCTD3Q9Y597 815 aa14.16□□□□□ -0.14
CDC42SE2-209ENST00000506419 BOD1L1Q8NFC6 3051 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 LILRA5A6NI73 299 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 PDZK1P1A8MUH7 402 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 BTNL10A8MVZ5 291 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 POP7O75817 140 aaKnown RBP14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 VIPP01282 170 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 PYGMP11217 842 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 SPAM1P38567 509 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 COPS2P61201 443 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 TBR1Q16650 682 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 DCAF12Q5T6F0 453 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 AGAP9Q5VTM2 703 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 TMEM220Q6QAJ8 160 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 FAM151BQ6UXP7 276 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 FAM83HQ6ZRV2 1179 aaPredicted RBP14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 LRRC57Q8N9N7 239 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 GDAP1Q8TB36 358 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 BRSK1Q8TDC3 778 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 ALG3Q92685 438 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 ASPSCR1Q9BZE9 553 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 STN1Q9H668 368 aaKnown RBP14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 FBXO8Q9NRD0 319 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 HACD3Q9P035 362 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 EFR3BQ9Y2G0 817 aa14.15□□□□□ -0.14
CDC42SE2-209ENST00000506419 GLYATL1P3A0A0U1RQE8 302 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 A0A0U1RQJ8 604 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 B8ZZF3 427 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 PJA2O43164 708 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 RAD1O60671 282 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 C9P02748 559 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 IDSP22304 550 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 CTNNA2P26232 953 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 LEPRP48357 1165 aaKnown RBP14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 ANKRD20A2Q5SQ80 823 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 GPRC6AQ5T6X5 926 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 ANKRD20A1Q5TYW2 823 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 ANKRD20A3Q5VUR7 823 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 DENND5AQ6IQ26 1287 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 XKR5Q6UX68 686 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 MICALCLQ6ZW33 695 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 GLT6D1Q7Z4J2 308 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 TRAPPC5Q8IUR0 188 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 CACNA2D3Q8IZS8 1091 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 CCDC112Q8NEF3 446 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 NAT14Q8WUY8 206 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 APOL2Q9BQE5 337 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 FICDQ9BVA6 458 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 GBA3Q9H227 469 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 EPB41L1Q9H4G0 881 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
CDC42SE2-209ENST00000506419 SDK2Q58EX2 2172 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 GRID2IPA4D2P6 1211 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 STX7O15400 261 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 CAPN5O15484 640 aaPredicted RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 UBXN7O94888 489 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 ITGB2P05107 769 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 RBP3P10745 1247 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 LIFP15018 202 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 AMD1P17707 334 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 ITGB6P18564 788 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 PSMB4P28070 264 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 PTPN7P35236 360 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 GEMP55040 296 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 RWDD2BP57060 319 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 RAB15P59190 212 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 EIF3EP60228 445 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 XIAPP98170 497 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 CCDC181Q5TID7 509 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 ZDHHC20Q5W0Z9 365 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 DARS2Q6PI48 645 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 AMZ2Q86W34 360 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 PLXDC1Q8IUK5 500 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 AVL9Q8NBF6 648 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 DDHD1Q8NEL9 900 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 CCDC110Q8TBZ0 833 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 RNF31Q96EP0 1072 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 TGM7Q96PF1 710 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 ZMYND15Q9H091 742 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 LUC7LQ9NQ29 371 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 SIDT1Q9NXL6 827 aaKnown RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 COL6A6A6NMZ7 2263 aa14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 MN1Q10571 1320 aaPredicted RBP14.13□□□□□ -0.15
CDC42SE2-209ENST00000506419 LOC101059948A0A1B0GTJ6 334 aa14.12□□□□□ -0.15
CDC42SE2-209ENST00000506419 KCNN4O15554 427 aa14.12□□□□□ -0.15
CDC42SE2-209ENST00000506419 SGTAO43765 313 aa14.12□□□□□ -0.15
CDC42SE2-209ENST00000506419 KCNJ13O60928 360 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms