RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LIMK2P53671 638 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 BRD3Q15059 726 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 ERCC6LQ2NKX8 1250 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PLEKHS1Q5SXH7 462 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PHACTR4Q8IZ21 702 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 DNAAF3Q8N9W5 541 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CHMP2BQ9UQN3 213 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM221BA6H8Z2 402 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 MEI4A8MW99 385 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 KMOO15229 486 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GRB7Q14451 532 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 TEAD4Q15561 434 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF648Q5T619 568 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 KDELC2Q7Z4H8 507 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR4C6Q8NH72 309 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 FLVCR1-AS1Q8TAF5 88 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GLMNQ92990 594 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 RHOJQ9H4E5 214 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 H3BMM5 538 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GFYI3L273 518 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 CER1O95813 267 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 MPC1LP0DKB6 136 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 BRAFP15056 766 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GNSP15586 552 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 XPAP23025 273 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 ACP1P24666 158 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR1P46091 355 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 PMS2P54278 862 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GRTP1Q5TC63 336 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 TMEM207Q6UWW9 146 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM83HQ6ZRV2 1179 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 LRRC56Q8IYG6 542 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZBED8Q8IZ13 594 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 PGBD3Q8N328 593 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD200R1Q8TD46 325 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR78Q96P69 363 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 SAYSD1Q9NPB0 183 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 MTRF1LQ9UGC7 380 aaKnown RBP8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC24A2Q9UI40 661 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 TTC28Q96AY4 2481 aa8.15□□□□□ -1.1
CDC42SE2-208ENST00000505065 UGT1A9O60656 530 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ENGP17813 658 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A6P19224 532 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A1P22309 533 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A4P22310 534 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 CNTFP26441 200 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A3P35503 534 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A5P35504 534 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 PPP1R3AQ16821 1122 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 HLA-BQ31612 363 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 SPATA16Q9BXB7 569 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARRDC1-AS1Q9H2J1 176 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ASB8Q9H765 288 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A7Q9HAW7 530 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A10Q9HAW8 530 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 UGT1A8Q9HAW9 530 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 WASF3Q9UPY6 502 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 DHRS7Q9Y394 339 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 KLK8O60259 260 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR1I1O60431 355 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 PSIP1O75475 530 aaKnown RBP8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 RASGRP1O95267 797 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 VAPBO95292 243 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF7P17097 686 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 SSTR1P30872 391 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 DNAJC3Q13217 504 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 PDE1CQ14123 709 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 RAET1GQ6H3X3 334 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 LCA5Q86VQ0 697 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 DENND6AQ8IWF6 608 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 HM13Q8TCT9 377 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ERLEC1Q96DZ1 483 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 CCM2Q9BSQ5 444 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 SEMA4GQ9NTN9 838 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 PDP2Q9P2J9 529 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 FBXO5Q9UKT4 447 aa8.15□□□□□ -1.11
CDC42SE2-208ENST00000505065 A0A1B0GVT2 93 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 TARM1B6A8C7 271 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CACNB4O00305 520 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 PRICKLE3O43900 615 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CCR7P32248 378 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 HSD17B3P37058 310 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 PLA2G5P39877 138 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 MRNIPQ6NTE8 343 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 LRIG3Q6UXM1 1119 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 LRRTM4Q86VH4 590 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CACUL1Q86Y37 369 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR2M4Q96R27 311 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CHRNA10Q9GZZ6 450 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 TCEAL2Q9H3H9 227 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 MGAT4DA6NG13 374 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 PATE3B3GLJ2 98 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CCL22O00626 93 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 LIN7AO14910 233 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms