RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PRMT5O14744 637 aaPredicted RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 PLRG1O43660 514 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 NIPSNAP2O75323 286 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 VPS26AO75436 327 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ESR1P03372 595 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SLC35E2BP0CK96 405 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 PKMP14618 531 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 CRHR1P34998 444 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 MPLP40238 635 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CCT5P48643 541 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SLC18A1P54219 525 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ADPRHP54922 357 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 GNGT1P63211 74 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ZBTB16Q05516 673 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SFSWAPQ12872 951 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 ITIH4Q14624 930 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CRY1Q16526 586 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SETMARQ53H47 684 aaPredicted RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 GPRC6AQ5T6X5 926 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 HENMT1Q5T8I9 393 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 PTRHD1Q6GMV3 140 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 LVRNQ6Q4G3 990 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CDHR3Q6ZTQ4 885 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ZNF765Q7L2R6 523 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CYP2U1Q7Z449 544 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 TBC1D1Q86TI0 1168 aaPredicted RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 KBTBD6Q86V97 674 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 PGBD3Q8N328 593 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SYNPOQ8N3V7 929 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CCDC63Q8NA47 563 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 OR14C36Q8NHC7 312 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 KCTD4Q8WVF5 259 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 HMGB4Q8WW32 186 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 GATA6Q92908 595 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CCDC97Q96F63 343 aaPredicted RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 DCUN1D1Q96GG9 259 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 MRGPRX1Q96LB2 322 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 FAM111AQ96PZ2 611 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 COPS8Q99627 209 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 BOCQ9BWV1 1114 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 P2RY12Q9H244 342 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 GPAMQ9HCL2 828 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 CD248Q9HCU0 757 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 SARS2Q9NP81 518 aaKnown RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
TPM3-218ENST00000505010 SMOXQ9NWM0 555 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 C2orf42Q9NWW7 574 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 DCDC2Q9UHG0 476 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 GNPTGQ9UJJ9 305 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ADAM21Q9UKJ8 722 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 FZD4Q9ULV1 537 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 NCKAP1Q9Y2A7 1128 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 VWA7Q9Y334 891 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 PCDHB1Q9Y5F3 818 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 COMMD10Q9Y6G5 202 aa9.25□□□□□ -0.93
TPM3-218ENST00000505010 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 CCDC163A0A0D9SF12 145 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 IGLON5A6NGN9 336 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 AGAP14A8MT82 685 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 CFAP99D6REC4 459 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 INPP4BO15327 924 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 RNGTTO60942 597 aaKnown RBP9.24□□□□□ -0.93
TPM3-218ENST00000505010 DNAJC6O75061 913 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 ATG13O75143 517 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 TM7SF2O76062 418 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 PCCBP05166 539 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 PYGLP06737 847 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 GSTA1P08263 222 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 CEACAM1P13688 526 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 GABRG2P18507 467 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 ITGB6P18564 788 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 RPS3P23396 243 aaKnown RBP eCLIP9.24□□□□□ -0.93
TPM3-218ENST00000505010 NSG1P42857 185 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 GPR1P46091 355 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 CSRP3P50461 194 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 KPNA2P52292 529 aaKnown RBP9.24□□□□□ -0.93
TPM3-218ENST00000505010 DGKEP52429 567 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 WDR4P57081 412 aaKnown RBP9.24□□□□□ -0.93
TPM3-218ENST00000505010 IRX4P78413 519 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 NUMA1Q14980 2115 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 SEL1L3Q68CR1 1132 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 KIAA1161Q6NSJ0 714 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 C16orf46Q6P387 395 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 USP30Q70CQ3 517 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 DET1Q7L5Y6 550 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 CLEC14AQ86T13 490 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 SPNS2Q8IVW8 549 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 RAVER1Q8IY67 606 aaKnown RBP9.24□□□□□ -0.93
TPM3-218ENST00000505010 PLD6Q8N2A8 252 aaKnown RBP9.24□□□□□ -0.93
TPM3-218ENST00000505010 CLDN19Q8N6F1 224 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 ARMC2Q8NEN0 867 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 TSTD1Q8NFU3 115 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 DENND1AQ8TEH3 1009 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 NAT14Q8WUY8 206 aa9.24□□□□□ -0.93
TPM3-218ENST00000505010 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms