RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 TAB2Q9NYJ8 693 aa5.91□□□□□ -1.46
GYPB-204ENST00000504951 CNOT8Q9UFF9 292 aaKnown RBP5.91□□□□□ -1.46
GYPB-204ENST00000504951 TCFL5Q9UL49 500 aa5.91□□□□□ -1.46
GYPB-204ENST00000504951 DNPEPQ9ULA0 475 aa5.91□□□□□ -1.46
GYPB-204ENST00000504951 DYRK1BQ9Y463 629 aa5.91□□□□□ -1.46
GYPB-204ENST00000504951 TACC2O95359 2948 aa5.91□□□□□ -1.46
GYPB-204ENST00000504951 ZGRF1Q86YA3 2104 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 A0A0U1RQS6 177 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 A0A1W2PQJ5 194 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TCRBV5S1A1TA0A578 114 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ARHGAP42A6NI28 874 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 J3KR12 359 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 NUAK1O60285 661 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZG16O60844 167 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 KCNJ13O60928 360 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 PALMO75781 387 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TIAF1O95411 115 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CAPN1P07384 714 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 UNGP13051 313 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 LHCGRP22888 699 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 EPHB2P29323 1055 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 SDC4P31431 198 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 RORAP35398 523 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ETV3P41162 512 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CAPZBP47756 277 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZNF135P52742 658 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 GFERP55789 205 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 JAM2P57087 298 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 POLR2FP61218 127 aaKnown RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 UBE2HP62256 183 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 RPL7AP62424 266 aaKnown RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 TUBB4BP68371 445 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CDR2Q01850 454 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 OGDHQ02218 1023 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 IL10RBQ08334 325 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 NFATC2Q13469 925 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TUBB2AQ13885 445 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 BECN1Q14457 450 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 SSPNQ14714 243 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TPD52L1Q16890 204 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 TCP11X2Q5H9J9 407 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 AGAP9Q5VTM2 703 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CACHD1Q5VU97 1274 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 RAET1GQ6H3X3 334 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 WDR59Q6PJI9 974 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 XKRXQ6PP77 449 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 RIPOR1Q6ZS17 1223 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 HSD11B1LQ7Z5J1 315 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 SLFN11Q7Z7L1 901 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZNF761Q86XN6 746 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZNF677Q86XU0 584 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 DSELQ8IZU8 1212 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZADH2Q8N4Q0 377 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 PPP4R1Q8TF05 950 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZFPM2Q8WW38 1151 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ITLN2Q8WWU7 325 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 INPP5DQ92835 1189 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ZNF514Q96K75 400 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 FER1L6-AS2Q96M78 137 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 PCMTD1Q96MG8 357 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 NUDCD1Q96RS6 583 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 LYSMD1Q96S90 227 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TREX2Q9BQ50 279 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 SLX1AQ9BQ83 275 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TUBB2BQ9BVA1 445 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 TBC1D10AQ9BXI6 508 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 ABCG8Q9H221 673 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CARD9Q9H257 536 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 VPS16Q9H269 839 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CLSTN2Q9H4D0 955 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 SLC40A1Q9NP59 571 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 NLRC4Q9NPP4 1024 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 KCND1Q9NSA2 647 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 FAM207AQ9NSI2 230 aaPredicted RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 POT1Q9NUX5 634 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 CNOT6Q9ULM6 557 aaKnown RBP5.9□□□□□ -1.46
GYPB-204ENST00000504951 NTNG1Q9Y2I2 539 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 SLC30A1Q9Y6M5 507 aa5.9□□□□□ -1.46
GYPB-204ENST00000504951 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.47
GYPB-204ENST00000504951 DCHS2Q6V1P9 2916 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 TRBV23OR9-2A0A075B6M9 112 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 A8MX80 341 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 MEN1O00255 615 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PES1O00541 588 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 CHUKO15111 745 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZNF185O15231 689 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CCP110O43303 1012 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CREB3O43889 395 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PRICKLE3O43900 615 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 FZD6O60353 706 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PGLSO95336 258 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 KRT3P12035 628 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 COX6B1P14854 86 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 FOLR1P15328 257 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 AMD1P17707 334 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 GPD1P21695 349 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 SOX5P35711 763 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ARCN1P48444 511 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 HCAR3P49019 387 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 SCNN1BP51168 640 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms