RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 AGAP20933 346 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 AP1S1P61966 158 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 SSPNQ14714 243 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 TLR1Q15399 786 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 DNTTIP2Q5QJE6 756 aaKnown RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 IGFL2Q6UWQ7 119 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 ENOSF1Q7L5Y1 443 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 TMEM200AQ86VY9 491 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 OR8K5Q8NH50 307 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 LRRC19Q9H756 370 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 ACTR5Q9H9F9 607 aaPredicted RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 MXRA5Q9NR99 2828 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 CCM2LQ9NUG4 571 aaPredicted RBP12.24□□□□□ -0.45
LSM6-204ENST00000504181 HPSEQ9Y251 543 aa12.24□□□□□ -0.45
LSM6-204ENST00000504181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 TLCD2A6NGC4 264 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 ESRRAP11474 423 aaPredicted RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 RPL10P27635 214 aaKnown RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 FOLR3P41439 243 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 SYKP43405 635 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 PAPOLAP51003 745 aaKnown RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 APBA1Q02410 837 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 LRRC63Q05C16 580 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
LSM6-204ENST00000504181 PLCL1Q15111 1095 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 CYP2A13Q16696 494 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 AGAP7PQ5VUJ5 663 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 TMEM198Q66K66 360 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 CATSPER1Q8NEC5 780 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 CXorf40BQ96DE9 158 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 SCRN2Q96FV2 425 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 AGAP4Q96P64 663 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 SMIM14Q96QK8 99 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 TAAR6Q96RI8 345 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 TLR10Q9BXR5 811 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 EPS8L2Q9H6S3 715 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 RMI1Q9H9A7 625 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 SP110Q9HB58 689 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 SOHLH2Q9NX45 425 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 TNFRSF10DQ9UBN6 386 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 CNOT6Q9ULM6 557 aaKnown RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
LSM6-204ENST00000504181 PTRH2Q9Y3E5 179 aaKnown RBP12.23□□□□□ -0.45
LSM6-204ENST00000504181 SNRNP200O75643 2136 aaKnown RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 A0A1W2PQ67 120 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 NUAK1O60285 661 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 SOCS5O75159 536 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 BRAFP15056 766 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 HADHAP40939 763 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 CLCNKAP51800 687 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 FOXL2P58012 376 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 TRAF2Q12933 501 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 AIMP2Q13155 320 aaKnown RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 CEBPEQ15744 281 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 INSCQ1MX18 579 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 TMTC4Q5T4D3 741 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 MLIPQ5VWP3 458 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 RPUSD3Q6P087 351 aaKnown RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 ARHGAP36Q6ZRI8 547 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 USP45Q70EL2 814 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 ACBD4Q8NC06 268 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 OR1N1Q8NGS0 311 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 MCCC1Q96RQ3 725 aaPredicted RBP12.22□□□□□ -0.45
LSM6-204ENST00000504181 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 SLC7A5P2Q9GIP4 190 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 SEC14L3Q9UDX4 400 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 TRIM10Q9UDY6 481 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
LSM6-204ENST00000504181 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 FADS2P1A8MWK0 482 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 MTA2O94776 668 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 ZBTB11O95625 1053 aaPredicted RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 ZNF8P17098 575 aaPredicted RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 CYP2A7P20853 494 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 SDC4P31431 198 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 NDUFA8P51970 172 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 DRG2P55039 364 aaKnown RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 CASP6P55212 293 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 PTSQ03393 145 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 ZNF648Q5T619 568 aaPredicted RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.45
LSM6-204ENST00000504181 PPP1R32Q7Z5V6 425 aa12.21□□□□□ -0.45
LSM6-204ENST00000504181 SLFN11Q7Z7L1 901 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms