RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ASB2Q96Q27 587 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CDK5RAP1Q96SZ6 601 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC32Q9BV29 185 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 EHD3Q9NZN3 535 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SEPT9Q9UHD8 586 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ANAPC7Q9UJX3 599 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TFR2Q9UP52 801 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TDRKHQ9Y2W6 561 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 H3BMM5 538 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3R2O00459 728 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TFECO14948 347 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 COBLO75128 1261 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FAM13AO94988 1023 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 S100A9P06702 114 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 KITP10721 976 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MBL2P11226 248 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SYN1P17600 705 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PSMA2P25787 234 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CRHR1P34998 444 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NPTX2P47972 431 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ADCY7P51828 1080 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 DYNLL1P63167 89 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PIGHQ14442 188 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FBXO43Q4G163 708 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NEK5Q6P3R8 708 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RFWD3Q6PCD5 774 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TTC7BQ86TV6 843 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RAB43Q86YS6 212 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF444Q8N0Y2 327 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 XXYLT1Q8NBI6 393 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM35BQ8NCS4 154 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RSAD2Q8WXG1 361 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SUSD3Q96L08 255 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF560Q96MR9 790 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM74Q96NL1 305 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CIB1Q99828 191 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GAL3ST1Q99999 423 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FTHL17Q9BXU8 183 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SLC7A5P2Q9GIP4 190 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HOXD1Q9GZZ0 328 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SMOC2Q9H3U7 446 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 IFT22Q9H7X7 185 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NT5DC2Q9H857 520 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 BRD9Q9H8M2 597 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FANCEQ9HB96 536 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HS3ST2Q9Y278 367 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HEY1Q9Y5J3 304 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NOX1Q9Y5S8 564 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SESN1Q9Y6P5 492 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 USP24Q9UPU5 2620 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 A0A1B0GVM2 712 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SDR42E2A6NKP2 422 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 AKAP10O43572 662 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GABARAPO95166 117 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 IL18RAPO95256 599 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NADKO95544 446 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HSPA4LO95757 839 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HPRP00739 348 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CD1AP06126 327 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 UBL4AP11441 157 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CREB1P16220 341 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CFL1P23528 166 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SPRP35270 261 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CPOXP36551 454 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 HPCAL1P37235 193 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GRIA2P42262 883 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 OR3A3P47888 321 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SEMG2Q02383 582 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF211Q13398 564 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC41Q15345 812 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ISXQ2M1V0 245 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SLC35F1Q5T1Q4 408 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GTF2IRD2BQ6EKJ0 949 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SULT1C3Q6IMI6 304 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SDE2Q6IQ49 451 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 C16orf46Q6P387 395 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ASB18Q6ZVZ8 466 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LINC00523Q86TU6 105 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GTF2IRD2Q86UP8 949 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 IFNL1Q8IU54 200 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FAM178BQ8IXR5 827 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 OR9Q1Q8NGQ5 310 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MCFD2Q8NI22 146 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RHBDF1Q96CC6 855 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TM9SF2Q99805 663 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM246Q9BRR3 403 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 VN1R3Q9BXE9 311 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TEKT3Q9BXF9 490 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NUAK2Q9H093 628 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SMYD3Q9H7B4 428 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC4CQ9HCJ2 640 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 OLAHQ9NV23 265 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NXF1Q9UBU9 619 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RAP2CQ9Y3L5 183 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 IGLON5A6NGN9 336 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MINDY4BA8MYZ0 360 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 H7C0C1 242 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms