RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 DEFB109BQ30KR1 87 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 TEX44Q53QW1 395 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 PDPK2PQ6A1A2 396 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 MFSD7Q6UXD7 560 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 TMEM26Q6ZUK4 368 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 RASGRP3Q8IV61 690 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 SLC25A41Q8N5S1 370 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 TFB1MQ8WVM0 346 aaKnown RBP10.56□□□□□ -0.72
SNCA-207ENST00000502987 ELMO2Q96JJ3 720 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 SLC45A3Q96JT2 553 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 C9orf72Q96LT7 481 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 TRIB3Q96RU7 358 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 ULBP3Q9BZM4 244 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 ABHD10Q9NUJ1 306 aa10.56□□□□□ -0.72
SNCA-207ENST00000502987 SCHIP1Q9P0W5 487 aaPredicted RBP10.56□□□□□ -0.72
SNCA-207ENST00000502987 ZNF624Q9P2J8 865 aaPredicted RBP10.56□□□□□ -0.72
SNCA-207ENST00000502987 SAE1Q9UBE0 346 aaPredicted RBP10.56□□□□□ -0.72
SNCA-207ENST00000502987 TLN1Q9Y490 2541 aaKnown RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 LILRA5A6NI73 299 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 AURKAO14965 403 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 CST8O60676 142 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 KATNA1O75449 491 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 COMTP21964 271 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 SLC1A1P43005 524 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 NR2C2P49116 596 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 DRG2P55039 364 aaKnown RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 UBE2IP63279 158 aaKnown RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 TMEM115Q12893 351 aaPredicted RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 PPP2R5EQ16537 467 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 ATP13A5Q4VNC0 1218 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 LRRC38Q5VT99 294 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 CACHD1Q5VU97 1274 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 IRGCQ6NXR0 463 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 FAM92BQ6ZTR7 304 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 PID1Q7Z2X4 250 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 TIPARPQ7Z3E1 657 aaKnown RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 ZC3H18Q86VM9 953 aaKnown RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 VSIG1Q86XK7 387 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 CCDC50Q8IVM0 306 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 ESX1Q8N693 406 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 BRSK1Q8TDC3 778 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 P3H4Q92791 437 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 STAMBPL1Q96FJ0 436 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 TEKT5Q96M29 485 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 OLFM3Q96PB7 478 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 OR6C1Q96RD1 312 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 ZNF71Q9NQZ8 489 aaPredicted RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 KLHL8Q9P2G9 620 aaPredicted RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 FAM153AQ9UHL3 310 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 TMEM184BQ9Y519 407 aaPredicted RBP10.55□□□□□ -0.72
SNCA-207ENST00000502987 SPO11Q9Y5K1 396 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 SLC30A1Q9Y6M5 507 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 COL12A1Q99715 3063 aa10.55□□□□□ -0.72
SNCA-207ENST00000502987 SPTA1P02549 2419 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 OR52A4PA6NMU1 304 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 CHUKO15111 745 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 ARHGAP6O43182 974 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 BUD23O43709 281 aaKnown RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 CCNYL3P0C7X3 344 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 NFKB1P19838 968 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 PTPN3P26045 913 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 PBLDP30039 288 aaPredicted RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 DLSTP36957 453 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 LEPRP48357 1165 aaKnown RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 ARL4DP49703 201 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 WNT3AP56704 352 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 TLE1Q04724 770 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 CDC20Q12834 499 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 SEPT6Q14141 434 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 NOMO1Q15155 1222 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 SKIDA1Q1XH10 827 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 SIRPB2Q5JXA9 342 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 CCDC181Q5TID7 509 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 ZDHHC20Q5W0Z9 365 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 AMZ2Q86W34 360 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 GALNT6Q8NCL4 622 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 IPMKQ8NFU5 416 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 BLOC1S5Q8TDH9 187 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 STARD8Q92502 1023 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 HAUS1Q96CS2 278 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 ZDHHC12Q96GR4 267 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 VPS35Q96QK1 796 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 SPRY4Q9C004 299 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 ZCCHC2Q9C0B9 1178 aaKnown RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 UCK1Q9HA47 277 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 NFKBIL1Q9UBC1 381 aaPredicted RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 LNPEPQ9UIQ6 1025 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 PSMD13Q9UNM6 376 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 PKP3Q9Y446 797 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 RPS6KL1Q9Y6S9 549 aa10.54□□□□□ -0.72
SNCA-207ENST00000502987 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
SNCA-207ENST00000502987 UBR5O95071 2799 aaPredicted RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 AKR1B15C9JRZ8 316 aaPredicted RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 TERTO14746 1132 aaKnown RBP10.53□□□□□ -0.72
SNCA-207ENST00000502987 MTSS1O43312 755 aa10.53□□□□□ -0.72
SNCA-207ENST00000502987 KIF1CO43896 1103 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms