RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SYT17Q9BSW7 474 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 POLR3CQ9BUI4 534 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 TEX12Q9BXU0 123 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 OSGEPL1Q9H4B0 414 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 EVA1AQ9H8M9 152 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 LTB4R2Q9NPC1 389 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 TCF7L2Q9NQB0 619 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 MTMR10Q9NXD2 777 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 TAS2R14Q9NYV8 317 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 CHORDC1Q9UHD1 332 aaPredicted RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 RALYQ9UKM9 306 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 PCDHGB4Q9UN71 923 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 PPIEQ9UNP9 301 aaKnown RBP3.18□□□□□ -1.9
PSPC1-205ENST00000497722 OR2W1Q9Y3N9 320 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
PSPC1-205ENST00000497722 LILRA5A6NI73 299 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 ANKRD66B4E2M5 251 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PRAC2D3DTV9 90 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 H0YIN7 160 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TMEM178BH3BS89 294 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TMEM189-UBE2V1I3L0A0 370 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 K7ENM7 598 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TULP2O00295 520 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 LINC01565O15544 149 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PLPP2O43688 288 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RSL1D1O76021 490 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 OR2C1O95371 312 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 BMP10O95393 424 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 ITGA2P17301 1181 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TCEA1P23193 301 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TM4SF1P30408 202 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 HOXA13P31271 388 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 HOXD13P35453 343 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 EIF2DP41214 584 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PSMC4P43686 418 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 NRIP1P48552 1158 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 SNRPEP62304 92 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 MRPS5P82675 430 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 CALD1Q05682 793 aaKnown RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TROAPQ12815 778 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 UBE2V1Q13404 147 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 ACVR2BQ13705 512 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 NTRK2Q16620 822 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 IGSF11Q5DX21 431 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RAB41Q5JT25 222 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TMEM198Q66K66 360 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 CFAP161Q6P656 301 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 FAM171BQ6P995 826 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TMCO3Q6UWJ1 677 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 FOXP4Q8IVH2 680 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PM20D2Q8IYS1 436 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RASGEF1CQ8N431 466 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TMEM255BQ8WV15 326 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RHBDF1Q96CC6 855 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 LINGO1Q96FE5 620 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PPP1R13BQ96KQ4 1090 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 EGLN2Q96KS0 407 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 TTC14Q96N46 770 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 PCYT2Q99447 389 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RTN4RQ9BZR6 473 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 SPRY4Q9C004 299 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 SDF2L1Q9HCN8 221 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 MARCH4Q9P2E8 410 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 SUCLA2Q9P2R7 463 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 ERRFI1Q9UJM3 462 aaPredicted RBP3.17□□□□□ -1.9
PSPC1-205ENST00000497722 B3GALT5Q9Y2C3 310 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 RABGAP1Q9Y3P9 1069 aa3.17□□□□□ -1.9
PSPC1-205ENST00000497722 ASPDHA6ND91 283 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 OR5K3A6NET4 321 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 A6NL46 340 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 FAM90A26D6RGX4 464 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 J3QR06 171 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CAPN9O14815 690 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 MITFO75030 526 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 AVILO75366 819 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CRYAAP02489 173 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 FAM106CPP0CH98 169 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 MMP9P14780 707 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PORP16435 677 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 UGT1A1P22309 533 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 APOBEC1P41238 236 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 ARSEP51690 589 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 STAT2P52630 851 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 ZNF132P52740 706 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CTSCP53634 463 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 BRWD1-AS2P59051 145 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 EPS8Q12929 822 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 STK4Q13043 487 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PRPF4BQ13523 1007 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 ACCSLQ4AC99 568 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 KRTCAP3Q53RY4 240 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 RARS2Q5T160 578 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PMS2CLQ68D20 193 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 RAD9BQ6WBX8 426 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 TPRG1Q6ZUI0 275 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms