RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 SHMT1P34896 483 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MAGEA2P43356 314 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 GDF10P55107 478 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PRMT2P55345 433 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 AP1S2P56377 157 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 RPS7P62081 194 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF169Q14929 603 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 FBXO43Q4G163 708 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PPM1JQ5JR12 505 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 IRAK1BP1Q5VVH5 260 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 GPALPP1Q8IXQ4 340 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CHPFQ8IZ52 775 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 FBXO30Q8TB52 745 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 AP3S1Q92572 193 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 UFD1Q92890 307 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 EXT2Q93063 718 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 FAM129BQ96TA1 746 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 HERPUD2Q9BSE4 406 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SYT11Q9BT88 431 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 NUSAP1Q9BXS6 441 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ERAP1Q9NZ08 941 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 DIMT1Q9UNQ2 313 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 A0A1B0GVM2 712 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 FAM159BA6NKW6 160 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CTDSP2O14595 271 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MAFO75444 373 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 UGT2B17O75795 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CNTN5O94779 1100 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CFBP00751 764 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 RAP2AP10114 183 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 GPC1P35052 558 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MAP2K4P45985 399 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PIK3CGP48736 1102 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 HK3P52790 923 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 UGT2B15P54855 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MLLT10P55197 1068 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 LIPEQ05469 1076 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SSX2Q16385 188 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 COL28A1Q2UY09 1125 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TIGD3Q6B0B8 471 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 RETSATQ6NUM9 610 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 HAGHLQ6PII5 290 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 STRADAQ7RTN6 431 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ZC3HC1Q86WB0 502 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PLPP6Q8IY26 295 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SERPINB11Q96P15 392 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 UHRF1Q96T88 793 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PI4K2AQ9BTU6 479 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 THUMPD3Q9BV44 507 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TRIM8Q9BZR9 551 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PRMT8Q9NR22 394 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 UFSP2Q9NUQ7 469 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CYB5R1Q9UHQ9 305 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 MGAT4BQ9UQ53 548 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 H0YCG3 227 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 DDX39AO00148 427 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 KCNK1O00180 336 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 NRP1O14786 923 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SUPT7LO94864 414 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CYBBP04839 570 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PGRP06401 933 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CNPP09543 421 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ICAM2P13598 275 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PHKG2P15735 406 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SPNP16150 400 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CBLP22681 906 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 IGFBP5P24593 272 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SDC4P31431 198 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 CSTF2P33240 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PSMD4P55036 377 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 OSTNP61366 133 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SIM2Q14190 667 aaPredicted RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SMCO1Q147U7 214 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 PSMD5Q16401 504 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 ATP6AP1LQ52LC2 224 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TATDN1Q6P1N9 297 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 TRMT10BQ6PF06 316 aaKnown RBP8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 BEND4Q6ZU67 534 aa8.11□□□□□ -1.11
CRNKL1-205ENST00000496549 SPRED1Q7Z699 444 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms